Achromobacter aegrifaciens: RA224_06375
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Entry
RA224_06375 CDS
T09343
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA224_06375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaeg03021
]
RA224_06375
Transcription machinery [BR:
aaeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RA224_06375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_11
HTH_23
PhyR_sigma-like
HTH_17
HTH_24
GerE
HTH_29
MerR
Xre-like-HTH
HTH_38
HTH_40
HTH_Tnp_4
DUF6031
HTH_7
TnsD
HTH_IclR
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WLW63047
LinkDB
All DBs
Position
1395795..1396304
Genome browser
AA seq
169 aa
AA seq
DB search
MPNPAVAAGDNVHLLYRAHHGWLHGWLRAKLGNSFDAADLAQDTFVRVLRHRHELDALRE
PRAYLTTIAKRLLLNHHRRRSVEQAYLEALALTPEALAPSAEQRLIILETLQEIDEMLAG
LSLPARQAFLMAQLEGLSHGEIAARLNVSLRTVHRYIAKGFEQCIMASI
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaatcccgcggtcgccgccggcgacaacgtccatctgctgtaccgcgctcatcat
ggatggctgcatggctggctgcgcgccaagctgggcaacagcttcgacgccgccgacctg
gcgcaggacaccttcgtgcgcgtgctgcgccaccgccacgaactggacgccttgcgcgag
ccgcgcgcctatctcaccaccatcgccaagcgcctgctgctgaaccaccaccggcggcgc
tcggtggaacaggcctatctggaagccctggccttgacgccggaggcgctggcgccctcg
gccgagcagcgcctgatcatcctggaaacgctgcaggagatcgacgagatgctggccggc
ctgtcgctgccggcccgccaggccttcctgatggcgcagctggaaggactgagccatggc
gaaatcgccgcccgcctgaacgtgtcgctgcgcaccgtgcatcgctacatcgccaaggga
ttcgaacaatgcatcatggcgtcgatctga
DBGET
integrated database retrieval system
