Achromobacter aegrifaciens: RA224_06935
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Entry
RA224_06935 CDS
T09343
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg00550
Peptidoglycan biosynthesis
aaeg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RA224_06935 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aaeg01002
]
RA224_06935 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aaeg01011
]
RA224_06935 (dacB)
Enzymes [BR:
aaeg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RA224_06935 (dacB)
Peptidases and inhibitors [BR:
aaeg01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
RA224_06935 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
aaeg01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RA224_06935 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
SAM_MT
Phage_holin_3_2
Motif
Other DBs
NCBI-ProteinID:
WLW63147
LinkDB
All DBs
Position
1508476..1509924
Genome browser
AA seq
482 aa
AA seq
DB search
MTGQAYKRRGGLKRWLAGGLLAVVAGAAWAQVPGLPPNVVNAWKASKLPDSSLSLVVQEV
GGPRLVALNAKESRNPASVMKLVTTWAALSELGPNYVWRTEFMTAPGARPDAKGVLSGPL
YLRAGGDPQFLLQDLWVLLRELRLRGVKQINDLVIDRSIFGQVATDPGAFDGAPDRAYNA
SPDALMVGFGAMRLLFTPDPAANKWVPLIDPPLPGLKIEGRVEWSDARCPGPPVVTTEPL
ITQQGVTIRVNGKVAGSCGEFSLYRLALSQPDYATEVFRMLWKELGGTFKGQVRSGMVPP
DAVVLASHDSPTLAEAIRQINKRSNNVMARTLLLTLGAERGRRPATVASSEAVAKGLLAK
QGLDMPELVIDNGAGLSRDARVSADSLASMLTVAWNSPVMPEYISSFAIAGVDGTVRRRL
KGDGTLGMAHLKTGSLRDVRSIAGYVLGASGKRYVVVSIVNHEQAGAVRAFDDALIAWLA
EQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacgggacaagcatataagcgtaggggcgggctgaagcgatggctggccggcgggctg
ctggccgtggtggcgggcgcggcctgggcgcaggtgcccggcctgccgcccaacgtggtg
aacgcctggaaagccagcaagctgcccgacagctccctgtccctggtggtgcaggaagtg
ggcgggccgcgcctggtggcgctgaatgccaaggagtcgcgcaatcccgcctcggtgatg
aagctggtcacgacctgggccgcgctgtccgagctgggacccaactacgtctggcgcacc
gaattcatgacggcgcccggcgcgcggcccgatgccaagggcgtgctgagcggcccgcta
tacctgcgggctggcggcgatccgcaattcctgctgcaggacctgtgggtgctgctgcgc
gaactgcgcctgcgcggcgtcaagcagatcaacgacctggtcatcgaccgcagcatcttc
ggccaggtcgcgaccgacccaggcgctttcgacggcgccccggaccgggcctacaacgcc
agcccggatgccctgatggtgggttttggcgcaatgcggctgctgttcacgccggacccc
gccgccaacaaatgggtgccgctgatcgatccgccgctgccgggcctgaagatcgagggc
cgcgtcgaatggagcgatgcccgctgccccgggcctcccgtggtgacgaccgaacccttg
atcacccagcagggcgtcacgatccgcgtgaacggcaaggtggccggctcctgcggcgaa
ttcagcctgtaccgcctggcgctgtcgcagcccgactacgccaccgaagtgttccgcatg
ctctggaaggagctgggcggcactttcaagggccaggtccgttccggcatggtgccgcct
gacgcggtggtgctggcctcgcacgattcgcccacgctggccgaggcgatccgccagatc
aacaagcgcagcaacaacgtcatggcgcgcaccttgctgctgaccctgggcgccgagcgc
ggccgccggcccgccaccgtcgccagcagcgaggccgtcgccaaggggctgctggccaag
cagggcctggatatgcccgagctggtcatcgacaacggcgccggcctgtcgcgcgacgcg
cgggtgtcggccgacagcctggcgtcgatgctgaccgtggcctggaactcgccggtcatg
cccgagtacatttcatcctttgcgatcgcgggggtggacggcacggtgcgccgccgcctc
aagggcgatggcaccctgggcatggcccacctgaagaccgggtcgctgcgcgacgtgcgt
tccatcgcaggctacgtgctgggcgccagcggcaagcgctacgtggtggtcagcatcgtc
aaccacgaacaggccggcgccgtgcgcgccttcgacgacgccctgatcgcctggctcgct
gaacaatga
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