Achromobacter aegrifaciens: RA224_08225
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Entry
RA224_08225 CDS
T09343
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg03030
DNA replication
aaeg03430
Mismatch repair
aaeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RA224_08225 (holA)
03430 Mismatch repair
RA224_08225 (holA)
03440 Homologous recombination
RA224_08225 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaeg03032
]
RA224_08225 (holA)
03400 DNA repair and recombination proteins [BR:
aaeg03400
]
RA224_08225 (holA)
Enzymes [BR:
aaeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RA224_08225 (holA)
DNA replication proteins [BR:
aaeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RA224_08225 (holA)
DNA repair and recombination proteins [BR:
aaeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RA224_08225 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
WLW63395
LinkDB
All DBs
Position
complement(1804462..1805517)
Genome browser
AA seq
351 aa
AA seq
DB search
MAQPLDADRLAEHLQRPGNRLAPLYTVSGDEPLLVTEAVDALRAAARNAGYTDRLSMVMD
ARSDWSSVTAATQSVSLFGDRRILEIKIPTGKPGKSGADTLAKLAEQAEKQADPDTLVLI
ALPRLDKATRESRWVQALSRGGMMVDIANIERGRLPAWVGMRLARQNQRADGATLQWMAD
KVEGNLLAAHQEIQKLGLLYPEGQLAAEDVERAVLNVARYDVFGLRDAMLAGDTGRTIRM
IDGLRAEGEALPLVLWAVGEEIRLLARIAEARALGQDVNGLMRRLRIFGAHERLALQALN
RVQPNVWPAAVQHAHEVDRLIKGLSVPGRLSDPWEEMTRLALRVAAAGGRP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcccctggacgcggatcgcctggccgagcacctgcagcggccaggcaaccgc
ctggcgccgctctatacggtttcgggcgacgaacccctgctcgtgaccgaggccgtggac
gccctgcgcgcggcggcccgcaacgcgggctacaccgaccgcctgtccatggtgatggac
gcgcgcagcgactggagttcggtcaccgccgccacgcaaagcgtgtcgctgttcggcgac
cgccgcatccttgaaatcaagatcccgacgggcaagcccggcaaatccggcgccgacacc
ctggccaagctggccgaacaggccgagaagcaggcggatccggacacgctcgtgctgatc
gccctgccccgcctggacaaggccacccgcgaaagccgctgggtgcaagccctgagccgc
ggcggcatgatggtcgatatcgccaacatcgaacgcggccgcctgcccgcctgggtcggc
atgcggctggcgcgccagaaccagcgcgccgacggcgccaccctgcaatggatggccgac
aaggtggaaggcaatctgctggccgcgcaccaggaaatccagaagctgggcctgctctac
cccgaaggccaactggccgcggaggacgtggagcgcgcggtgctgaacgtcgcgcgctac
gacgtcttcggcttgcgcgacgccatgctcgccggcgacaccggccgcaccatccgcatg
atcgacggcctgcgcgccgaaggcgaagccctgccgctggtgctgtgggcggtcggcgag
gaaatccgcctgctggcccgcatcgccgaagcgcgcgccctgggccaggacgtcaacggc
ctgatgcgccgtctgcgcattttcggcgcgcacgaacggctggcgctgcaggcgctgaac
cgggtacagccgaacgtgtggccggccgccgtgcagcatgcccatgaggtcgaccgcctg
atcaagggcctgtcggtgccgggacgcctgtccgatccctgggaagaaatgacgcggctc
gcgctgcgcgtcgccgccgcgggcggacgaccgtga
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