Achromobacter aegrifaciens: RA224_11460
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Entry
RA224_11460 CDS
T09343
Name
(GenBank) LysR family transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
aaeg
Achromobacter aegrifaciens
Module
aaeg_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaeg03000
]
RA224_11460
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
aaeg01504
]
RA224_11460
Transcription factors [BR:
aaeg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RA224_11460
Antimicrobial resistance genes [BR:
aaeg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
RA224_11460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
Sec8_N
ExbD
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WLW64008
LinkDB
All DBs
Position
2469916..2470836
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AA seq
306 aa
AA seq
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MDRFDAMQAFARVVETGSFTKAAETLHMSKTSVTQLVQQLEARLRVKLLNRTTRKVNVTA
DGAAYYERVLRLLADMDDAETSLSGASAAPRGRLRVDVPSPLARLVLVPALPAFHAQYPD
IQLDMGVSDRIVDLIGENVDCVVRGGELADQSLMARRVGDLRLGVYAAPEYLERAGTPAH
PRELEDTHHRIVGFLWARNGKALPYAMRRDGESIKVHGRHVLAVDDGNAYLAAGLAGLGV
LWLPDYMSRAHVDSGELVPLFQDWRLDSMPMYVAFPPNRHVSAKLRVFIDWVAGLLGQYT
PEPPRA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtttcgacgcgatgcaggccttcgcccgcgtggtggaaaccggcagcttcacc
aaggcggccgagaccctgcacatgagcaagaccagcgtgacgcaactggtgcagcaattg
gaggcgcgcttgcgcgtcaagctgctgaaccgcaccacccgcaaggtcaacgtgacggcc
gacggcgcggcctactatgaacgcgtgctgcggctgctggccgacatggacgatgccgag
accagcctgtccggggcctcggcggcgccgcgggggcgtttgcgcgtggacgtgcccagc
ccgctggcgcgcctggtgctggtgccggcattgccggcgttccacgcgcagtacccggac
atccagctggacatgggcgtgagcgaccggatcgtcgatctgatcggcgagaacgtcgac
tgcgtggtgcgcggcggcgaactcgccgaccagtcgctgatggcgcgccgcgtgggcgat
ctgcggctgggcgtgtacgcggcgccggagtacctggagcgcgccggcacgcccgcgcat
ccgcgcgagctggaggacacgcaccaccgcatcgtgggctttctatgggcgcgcaacggc
aaggcgctgccctacgccatgcgccgcgacggcgagagcatcaaggtgcatggccgccat
gtgctggcggtcgacgacggcaacgcctatctggcggccggtctggccgggctgggcgtg
ctctggctgcccgactacatgtcacgcgctcacgtcgacagcggcgagctggtgccgctg
ttccaggactggcgcctggattccatgccgatgtacgtggcgtttccgcccaaccggcac
gtgagcgccaagctgcgcgtgttcatcgattgggtcgccgggctgttggggcagtacacg
cccgagccgccgcgcgcctga
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