KEGG   Achromobacter aegrifaciens: RA224_18685
Entry
RA224_18685       CDS       T09343                                 
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
aaeg  Achromobacter aegrifaciens
Pathway
aaeg03030  DNA replication
aaeg03430  Mismatch repair
aaeg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aaeg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RA224_18685 (holB)
   03430 Mismatch repair
    RA224_18685 (holB)
   03440 Homologous recombination
    RA224_18685 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aaeg03032]
    RA224_18685 (holB)
   03400 DNA repair and recombination proteins [BR:aaeg03400]
    RA224_18685 (holB)
Enzymes [BR:aaeg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RA224_18685 (holB)
DNA replication proteins [BR:aaeg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RA224_18685 (holB)
DNA repair and recombination proteins [BR:aaeg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RA224_18685 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 HolB_lid
Other DBs
NCBI-ProteinID: WLW59264
LinkDB
Position
complement(4016735..4017826)
AA seq 363 aa
MNATRAAKDEDVKASNAPQFLPWQAETARNWLGNRDRFAHAWLIHGLAGIGKLDFAVAAA
ASLLCETPDNGLACGRCAACAWFASGNHPDLRRIRPEAVAVEEGADAAEPSEDAEPATGA
AKRAPSKEIRIDQIRSLESWFNTATHRGGWRVALLYPAHALNVVSSNALLKVLEEPPPHT
VFLLVADAPDRLLPTLVSRCRRLPLPAPDPDTALQWLREQNVEPAREWLAAAGGAPLAAL
RLAQSNESACPAWLTQLVGPLSKGQSPDVGTLAEALEKVAASEWIDALQRLYTDLMLAGA
GAPSRYFPALGSAVAQVAARMNPAKVAEAARWLTRQRALATHPLNAKLFAHATLQRVVLS
CLA
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgaatgcgacccgcgccgccaaagacgaggacgtcaaggcgtccaacgcgccgcagttc
ctgccctggcaggccgagacggcgcgcaactggctcggcaaccgcgatcgcttcgcccat
gcctggctgatccatgggctggccggcatcggcaaactggacttcgcggtcgccgcggcg
gccagcctgctgtgcgaaacgccggacaatggcctggcttgcggccgttgcgccgcctgc
gcctggttcgccagcggcaatcatcccgacctgcgccgcatccgccccgaggccgtggcg
gtggaagagggcgcggacgccgccgagccctcggaagacgccgaacccgccacgggcgcg
gccaagcgcgcgccgtccaaggaaatacgcatagaccagatccgttcgctggaatcctgg
ttcaacaccgccacgcaccgcggcggctggcgcgtagcgctgctgtacccggcccatgcg
ctgaacgtggtgtcgtccaacgccttgctcaaagtgctggaagagccgccgccgcacacg
gtctttctgctggtcgcggatgcgccggaccgccttttgcccacgctggtgtcgcgttgc
cggcgtttgccgctgcccgcgccggaccccgacaccgcgctgcaatggctgcgcgagcag
aacgtggaaccggcccgcgaatggctggcggcggccggcggcgcgccgctggcggcgttg
aggctggcccagtcgaacgaatccgcttgtccggcctggctgacccagctggtcgggccg
ctgtccaagggccagtcgcccgacgtcggcacgctggccgaggccctggaaaaagtggcg
gccagcgaatggatcgacgccttgcagcgcctatatacggacctgatgctggccggcgcg
ggggcgccgtcgcgctacttcccggccctgggcagcgcggtcgcgcaggtcgccgcgcgc
atgaatccggccaaggtggccgaggccgcgcgctggctgacgcgccagcgcgcgctggcc
acccatcccttgaacgccaagctcttcgcccacgcgaccttgcagcgcgtggtgctatcc
tgcctggcgtaa

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