Achromobacter aegrifaciens: RA224_18685
Help
Entry
RA224_18685 CDS
T09343
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg03030
DNA replication
aaeg03430
Mismatch repair
aaeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RA224_18685 (holB)
03430 Mismatch repair
RA224_18685 (holB)
03440 Homologous recombination
RA224_18685 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaeg03032
]
RA224_18685 (holB)
03400 DNA repair and recombination proteins [BR:
aaeg03400
]
RA224_18685 (holB)
Enzymes [BR:
aaeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RA224_18685 (holB)
DNA replication proteins [BR:
aaeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RA224_18685 (holB)
DNA repair and recombination proteins [BR:
aaeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RA224_18685 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
WLW59264
LinkDB
All DBs
Position
complement(4016735..4017826)
Genome browser
AA seq
363 aa
AA seq
DB search
MNATRAAKDEDVKASNAPQFLPWQAETARNWLGNRDRFAHAWLIHGLAGIGKLDFAVAAA
ASLLCETPDNGLACGRCAACAWFASGNHPDLRRIRPEAVAVEEGADAAEPSEDAEPATGA
AKRAPSKEIRIDQIRSLESWFNTATHRGGWRVALLYPAHALNVVSSNALLKVLEEPPPHT
VFLLVADAPDRLLPTLVSRCRRLPLPAPDPDTALQWLREQNVEPAREWLAAAGGAPLAAL
RLAQSNESACPAWLTQLVGPLSKGQSPDVGTLAEALEKVAASEWIDALQRLYTDLMLAGA
GAPSRYFPALGSAVAQVAARMNPAKVAEAARWLTRQRALATHPLNAKLFAHATLQRVVLS
CLA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgacccgcgccgccaaagacgaggacgtcaaggcgtccaacgcgccgcagttc
ctgccctggcaggccgagacggcgcgcaactggctcggcaaccgcgatcgcttcgcccat
gcctggctgatccatgggctggccggcatcggcaaactggacttcgcggtcgccgcggcg
gccagcctgctgtgcgaaacgccggacaatggcctggcttgcggccgttgcgccgcctgc
gcctggttcgccagcggcaatcatcccgacctgcgccgcatccgccccgaggccgtggcg
gtggaagagggcgcggacgccgccgagccctcggaagacgccgaacccgccacgggcgcg
gccaagcgcgcgccgtccaaggaaatacgcatagaccagatccgttcgctggaatcctgg
ttcaacaccgccacgcaccgcggcggctggcgcgtagcgctgctgtacccggcccatgcg
ctgaacgtggtgtcgtccaacgccttgctcaaagtgctggaagagccgccgccgcacacg
gtctttctgctggtcgcggatgcgccggaccgccttttgcccacgctggtgtcgcgttgc
cggcgtttgccgctgcccgcgccggaccccgacaccgcgctgcaatggctgcgcgagcag
aacgtggaaccggcccgcgaatggctggcggcggccggcggcgcgccgctggcggcgttg
aggctggcccagtcgaacgaatccgcttgtccggcctggctgacccagctggtcgggccg
ctgtccaagggccagtcgcccgacgtcggcacgctggccgaggccctggaaaaagtggcg
gccagcgaatggatcgacgccttgcagcgcctatatacggacctgatgctggccggcgcg
ggggcgccgtcgcgctacttcccggccctgggcagcgcggtcgcgcaggtcgccgcgcgc
atgaatccggccaaggtggccgaggccgcgcgctggctgacgcgccagcgcgcgctggcc
acccatcccttgaacgccaagctcttcgcccacgcgaccttgcagcgcgtggtgctatcc
tgcctggcgtaa
DBGET
integrated database retrieval system