Achromobacter aegrifaciens: RA224_19825
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Entry
RA224_19825 CDS
T09343
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
aaeg
Achromobacter aegrifaciens
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaeg03000
]
RA224_19825 (rtcR)
Transcription factors [BR:
aaeg03000
]
Prokaryotic type
Other transcription factors
Others
RA224_19825 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA
AAA_5
AAA_22
AAA_16
NACHT
MCM
AAA_2
AAA_18
ATPase_2
T2SSE
IstB_IS21
AAA_19
NTPase_1
AAA_30
AAA_7
AAA_14
AAA_29
AAA_33
TsaE
TniB
DUF6213
ABC_tran
ResIII
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
WLW59481
LinkDB
All DBs
Position
4266512..4268125
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AA seq
537 aa
AA seq
DB search
MQKKNVVIGFLGTQLDAGQGAGRWAKWRPTVSLVQHEDTLIHRLELFYPTRYKALAQVMQ
QDIANLSPDTIVNLIPMDFADPWDFGEMYGALYDWTRGYRFDPEREQYWAHITTGTHVAQ
ICMFLMVESRAIPGVLLQTAPPRKQAGEGPGKYTLIDLDLSRYDVLARRFSQAREDALQF
LKSGIATRNKAFNTLIEEIERVAVRSQAPILLTGPTGAGKSHLARRMYELKKSRHQVQGE
FVEVNCATLRGDGAASTLFGHKKGAFTGAAADRAGLLRTAHQGVLFLDEIGELGLDEQAM
LLKAVEEKRFLPMGSDRETSSDFQLIAGTHRDLRVDVAQGRFREDLYARINLWSYDLPGL
ARRPEDIEPNVDHLLMRSAEETGAVVRFNAEARTRYLKFARSSEAKWIGNFRDLSASITR
LATLADGGRIPLELVEAEIQRLNWLWQRGAPADRDGDRTRLDALLPADAADGLDLFDRLQ
LQAVIGVCRQSNSLSEAGRKLYNRSRAQRTVVNDADRLRKYLLKFGLNWESVSGREG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaagaacgtcgtcatcggcttcctcggcacccagctggatgccggccagggt
gcaggccgctgggcgaaatggcggcccacggtatcgctggtccagcacgaagacacgctg
atccaccggctcgaactgttctatccgacgcgctacaaggcgctggcccaggtgatgcag
caggacatcgccaacctgtcgcccgacacaatcgtgaacctgatcccgatggacttcgcc
gatccctgggattttggcgaaatgtacggggcgctctacgactggacgcgcggctatcgt
ttcgacccggagcgcgagcagtactgggcgcacatcaccaccggcacgcacgtcgcgcag
atctgcatgttcctgatggtggagtcgcgcgccattcctggcgtgctgctgcagaccgcg
ccgcccaggaagcaggcgggcgaaggtcccggcaagtacacgctgatcgatctggacctg
tcgcgctacgacgtgctggcccgccgcttcagccaggcgcgcgaggacgcgctgcaattc
ctcaagagcggcattgccacgcgcaacaaggcgttcaatacgctgatcgaagagatagaa
cgggtggcggtgcgctcgcaggcgcccatcctgctgaccggccccaccggcgcgggcaag
tcgcacctggcgcgccgcatgtacgaattgaagaagtcccgtcaccaggtccagggcgaa
ttcgtcgaggtcaattgcgccacgctgcgcggcgacggcgccgcctcgacgctgttcggc
cacaagaaaggcgctttcaccggcgcggctgcggaccgggccggcctgctgcgcacggcc
caccagggcgtgctgttcctggacgaaatcggcgaactcggcctggacgagcaggccatg
ctgctcaaggccgtggaagaaaagcgcttcctgcccatgggcagcgaccgcgagaccagc
agcgacttccagctgatcgccggcacccaccgcgacctgcgcgtggacgtggcgcagggg
cgcttccgcgaagacctgtatgcgcgcatcaacctgtggtcctatgacctgcccgggctg
gcgcggcggcccgaggacatcgagcccaacgtcgaccacctgctcatgcggtccgccgag
gaaaccggcgccgtggtccggttcaacgccgaagcgcgcacgcgctacctgaagttcgcc
agatcgtccgaggccaaatggatcggcaacttccgcgacctgtcggccagtatcacgcgg
ctggcgacgctggcggacggcggccggatcccgctggaactggtggaagccgagatccag
cgtctgaactggctatggcagcgcggcgcgcccgcggaccgcgacggcgacaggacgcgc
ctggacgcgctgctgcccgccgacgcggccgatggcctcgacctgttcgatcgcctgcag
ctccaagccgtcatcggcgtgtgccggcaatcaaactcgctgtccgaggcgggacgcaag
ctgtacaaccgctcgcgcgcgcaacgcaccgtggtcaacgatgctgaccgcctgcgcaaa
tatctgctgaaattcggcttgaactgggaaagcgtttcgggccgcgaaggctga
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