KEGG   Achromobacter aegrifaciens: RA224_22620
Entry
RA224_22620       CDS       T09343                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
aaeg  Achromobacter aegrifaciens
Pathway
aaeg02020  Two-component system
Brite
KEGG Orthology (KO) [BR:aaeg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RA224_22620
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:aaeg02022]
    RA224_22620
Two-component system [BR:aaeg02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   RA224_22620
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 AAA Mg_chelatase AAA_3 AAA_16 AAA_7 IIGP
Other DBs
NCBI-ProteinID: WLW60009
LinkDB
Position
4843075..4844484
AA seq 469 aa
MNRAPEFPPAAPASIDDSLRQPFSPRAVFIDDDDELLRANAQTLKLHGIAVDAHASARSA
LPALTRDFDGVVVSDIRMPDMDGLQLFQRLRDIDPDIPVILITGHGDIATAVQCMRDGAY
DFLAKPYAADRLITAIMHAAEKRHLVLENRRLREAAFAVEADEVPFIGATPAMQRIKQTL
RHIADADVDVLVEGETGTGKEVVATALHRLSRRRHRALVAINCGALPESVIESELFGHEP
GAFTGAQKKRIGRIEHASGGTLFLDEIESMPLAVQVKLLRVLESRQITPLGSNEVRNLDL
RVVAATKEDLGSPAIRAKFREDLFYRLNVVTIRIPPLRERREDIPLLFAHYLGHASRRFQ
RDIPEMPASIKQHVMTHDWPGNVRELAHFAERVVLGVLNTPAPPTAMAQDAAASLPDRME
RFEAQLIREALQAHQGDIKATLESLGIPRKTFYDKLQRHGIDRQQYTQQ
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgaaccgcgctcctgaatttcctcccgccgcaccggcatccatcgacgacagcctgcgc
cagccgttctcgccgcgcgccgtgttcatcgacgacgacgacgaactgctgcgcgccaat
gcgcagacgctgaagctgcatggcatcgccgtggacgcgcatgccagcgcgcgctctgcg
ctgcccgcgctgacgcgcgatttcgacggcgtggtcgtcagcgacattcgtatgcccgac
atggacggcttacagctcttccagcgcttgcgggacatcgaccccgacattcccgtcatc
ctgatcaccggccatggcgacatcgccaccgccgtgcaatgcatgcgagacggcgcctac
gacttcctggcgaaaccctatgccgccgacaggctgatcaccgccatcatgcacgctgcg
gaaaagcgccaccttgtgctggaaaaccgccggctgcgcgaggccgcgttcgccgtcgag
gccgacgaagtgcctttcatcggcgccacgcccgccatgcagcgcatcaagcaaacgctg
cggcatatcgcggatgcggacgtggacgtcctggtcgaaggcgagaccggaaccggcaag
gaagtcgttgccaccgccttgcatcgcctgagccgccgcaggcaccgcgctctcgtcgcg
atcaattgcggcgccctgcccgaaagcgtcatcgaaagcgaactgttcggccacgagccc
ggcgctttcaccggcgcccaaaagaagcgtatcggccgcatcgagcacgccagcggcggc
acgctgttcctggacgagatcgaaagcatgccgctggcagtgcaggtcaagctgctacgc
gtgcttgaatcccgccagatcactcccctgggcagcaacgaagtgcgcaatctggacctg
cgcgtggtcgccgccaccaaggaggacctgggcagtccggccatacgcgccaagtttcgc
gaggacctgttctaccgcctcaatgtcgtcaccatccggattccgccgctgcgcgagcgc
cgcgaggacattccgctgctgtttgcccactacctcggccacgcatcgcgccgcttccag
cgcgacatcccggaaatgccggcgtccatcaagcaacatgtcatgacgcacgattggccc
ggcaatgtgcgtgaactcgcgcatttcgccgaacgcgtcgttcttggcgtgctgaatacc
cctgccccgccaaccgccatggcccaggacgccgcggcgagcctgccggaccggatggag
cgcttcgaagcgcagctcatccgcgaggcactccaggcgcaccagggcgacatcaaggcc
accctggagtcgctgggcattccgcgcaagaccttctacgacaagctgcagcgccacggc
atcgaccgccagcagtacacgcaacagtag

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