Achromobacter aegrifaciens: RA224_22755
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Entry
RA224_22755 CDS
T09343
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg03030
DNA replication
aaeg03430
Mismatch repair
aaeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RA224_22755 (dnaE)
03430 Mismatch repair
RA224_22755 (dnaE)
03440 Homologous recombination
RA224_22755 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaeg03032
]
RA224_22755 (dnaE)
03400 DNA repair and recombination proteins [BR:
aaeg03400
]
RA224_22755 (dnaE)
Enzymes [BR:
aaeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RA224_22755 (dnaE)
DNA replication proteins [BR:
aaeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RA224_22755 (dnaE)
DNA repair and recombination proteins [BR:
aaeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RA224_22755 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
WLW60030
LinkDB
All DBs
Position
complement(4873090..4876584)
Genome browser
AA seq
1164 aa
AA seq
DB search
MSEEAVTTPSPFVHLRVHSEFSVVDGIVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFY
KGARGAGIKPIAGCDVWLSNDDDPAKPFRLLLLVRNHQGYLNLCELLTKAFLTNQGKGRA
EIRREWLQGQEGLIALSGGRGGDVGQALDAGNAVSALALARQWAHLFPGSYYIELQRAGM
DGDEAYTQAAMRLASEAGLPVVATHPVQFLDEFEFQAHEARVCIAEGEILANPRRVRRFS
KEQYLLSSEEMARRFADVPSALANTVEIAKRCNLSLVLGKPRLPNFPTPDGVSLDDYLVQ
LSEEGLEKRMEFLFPDEAERASKREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNN
GVPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERV
IDYVKEKYGRAAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWSLE
RTLKDEPAFKDRYEQEEEVRALVDLAQPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQP
GQENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNEDKRDFDVMALALDD
PAAYKILCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVN
RKHGRAAVDYFHDDLENTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPE
EMAKHRELFEQGAKEKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYH
PTEFLAATMSSDMDDTDKVQIFCRDAQDNGVEVLPPDVNFSGYRFEPVADKHTKNGKPPR
TMRYGLGAVKGTGQGAVEDILRARKEGGPFQNLFDFCRRVSKQAVNRRTIEALIKAGAFD
TIEPNRAAMLASVPTAMEAAEQAARSANQASLFGDDSGDVVAGELAKVAPWDLHKKLTEE
KSALGYYYSGHLFDAWRDEVRRIVPMQLVRVEPQRDLQWMCGVLASVRVMMTRRGKMVFA
VLDDGTAQVEISVFNELYEKHRNRLREDQLVIVQGKVSNDDYSGGMRIVAEQLYDLQLAR
EARAKSLRVKLNGSADAARLRQMLNPFRAEPENGIPGVPVDIVYTKNNFLCTVRLGEEWR
VRMADTLLANLNEWTKPDGVEVTY
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaagccgtaacaaccccgtccccatttgttcacctgcgcgtacactccgaa
ttttcggtcgtggacggcatcgtgcgcatccccgacctcatcaaacgcgtggccaagctg
ggccagcccgccgtcgccttgacggatctgtcgaacctgttcggcctgatcaagttctac
aagggcgcgcgcggcgccggcatcaagccgattgccggctgcgatgtctggctgtccaac
gacgacgaccccgccaagcctttccgcctgctgctgctggtgcgcaaccaccagggctac
ctcaatctctgcgaactgctgaccaaagccttcctgacgaaccagggcaagggccgcgcc
gagatccgccgcgaatggctgcaggggcaggagggcctgatcgccctgtcgggcgggcgc
ggcggcgatgtgggccaggcgctggacgcgggcaacgccgtgtcggcgctggcgctggcg
cgccagtgggcgcacctgttcccgggcagctactacatcgagttgcagcgcgccggcatg
gacggcgacgaagcctacacccaggccgccatgcgcctggccagcgaggccggcttgccg
gtggtggcgacgcatccggtgcagttcctggacgagttcgaattccaggcgcacgaggcc
cgcgtctgcatcgccgaaggcgaaatcctggccaacccgcgccgcgtgcgccggttcagc
aaggagcaatacctgctcagctccgaggaaatggcccggcgcttcgccgacgtgccctcg
gcgctggccaacacggtggaaatcgccaagcgctgcaacctcagcctggtgctgggcaag
ccgcgcctgcccaacttccccacgccggacggcgtgagcctggacgactacctggtccag
ctgtcggaagagggcctggaaaagcgcatggagttcctgttcccggacgaggccgaacgc
gcctccaagcgcgagcagtactacgaacgcctgcgctgggaatgcaagaccatcatccag
atgggcttccccggctacttcctgatcgtgcaggacttcatcaactggggcaagaacaac
ggcgtgccggtggggccgggccggggttccggcgcgggctcgctggtggcctatgccctg
ggcattaccgacctggatccgatccgctacgacttgctgttcgagcgcttcctgaatccc
gagcgggtttccatgcccgacttcgatatcgatttctgccaggacaaccgcgaacgggtc
atcgactacgtcaaggaaaagtacggccgcgccgccgtgagccagatcgccaccttcggc
acgctgggcgccaaggccgtggtgcgcgacgccggccgcgtgctggacatgccctatatg
ttctgcgacggcctgtccaagctgatcccgttcaatccgatggatccctggtcgctcgaa
cgcaccctgaaggacgagcctgccttcaaggaccgctacgaacaggaagaggaagtgcgc
gcgctggtggacctggcgcagccgctggaaggcctgacccgcaacatcggcatgcacgcc
ggcggcgtgctgattgcgccgggcaagctgacggacttctgcccgctgtattgccagccc
ggccaggaaaacagcgcggtttcgcagttcgacaaggacgacgtcgaggccgccggcctg
gtgaagttcgacttcctgggcctgcgcaacctgacgatcctggactgggccgtgcgctac
gtgcgccagttcaacgaggacaagcgcgacttcgacgtcatggccctggcgctggacgat
ccggccgcctacaagatcctgtgcgacgccaacacgaccgccgtgttccagctggaatcg
cgcggcatgaaggaactgctgaagaagctgcggcccaacaccttcgaagacatcatcgcc
atgctggccctgtaccgtccggggccgctggaatcgggcatggtggacgacttcgtcaac
cgcaagcacggccgcgccgcggtggattatttccacgacgacctggagaacaccctcaag
agcacctacggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcatcggc
ggctattcgctgggcggcgccgacctgctgcggcgcgccatgggcaagaaaaagcccgag
gaaatggccaagcaccgggaactgttcgagcagggcgccaaggaaaagggccacgatccg
gacctggcggtcaagctgttcgacctgatggagaagttcgcgggctacggcttcaacaag
tcgcactcggccgcgtacgcgctgatctcttaccagacggcatggctcaaggcctaccat
ccgaccgagttcctggccgcgaccatgtcctcggacatggacgacacggacaaggtccag
atcttctgccgcgacgcccaggacaacggcgtcgaggtgctgccgcccgacgtcaatttc
tcgggctaccgcttcgagccggtcgccgacaagcacaccaagaacggcaagccgccgcgc
accatgcgctacggcctgggggcggtcaagggcacggggcagggcgcggtcgaggacatc
ctgcgcgcgcgcaaggaaggcggcccgttccagaacctgttcgacttctgccgccgcgtc
agcaagcaggcggtcaaccgccgcaccatcgaagccctgatcaaggccggcgccttcgac
accatcgaacccaaccgggcggcgatgctggcttcggtgcccaccgccatggaagccgcc
gagcaggcggcccgcagcgccaaccaggcctcgctgttcggcgacgacagcggcgacgtg
gtggcgggcgaactcgccaaggtcgcaccctgggatctgcacaagaagctgaccgaagaa
aagtccgcgctgggctattactacagcggccacctgttcgacgcctggcgcgacgaagtg
cgccgtatcgtgcccatgcagctggtgcgggtcgaaccgcagcgcgacctgcaatggatg
tgcggcgtgctggccagcgtgcgcgtcatgatgacccgccgcggcaagatggtcttcgcg
gtgctggacgacggcaccgcgcaggtcgaaatctcggtcttcaacgagctctacgaaaag
caccgcaaccgcctgcgcgaagaccagctggtgatcgtccagggcaaggtcagcaatgac
gactactccggcggcatgcgcatcgtggccgagcagctctacgacctgcagctggcgcgc
gaagcccgcgccaagtccctgcgcgtcaagctcaacggcagcgccgacgcggcgcgcctg
cggcagatgctgaatccgttccgggccgagcccgagaacggcattccaggcgtgccggtc
gatatcgtctataccaagaacaatttcctgtgcaccgtccgcctgggcgaagagtggcgc
gtccgcatggccgacacgctgctcgccaacttgaatgaatggaccaaacccgatggcgtg
gaggtcacgtattga
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