Achromobacter aegrifaciens: RA224_24590
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Entry
RA224_24590 CDS
T09343
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA224_24590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaeg03021
]
RA224_24590
Transcription machinery [BR:
aaeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RA224_24590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
HTH_24
Rv2175c_wHTH
HTH_11
HTH_31
Motif
Other DBs
NCBI-ProteinID:
WLW60378
LinkDB
All DBs
Position
complement(5267753..5268286)
Genome browser
AA seq
177 aa
AA seq
DB search
MSSTLLSASAARTDPSAAPVDGLYRDHRSWLFGWLRRRLGCEHRAEDLAQDVFLRVIQGR
KAVRAAEARGLLTTIAKGLVVDHQRHAALERAYLAYLAAIPEAYAPSPEEQTEQLQSLAR
LDRLLDGLPPKARSAFLLSQLDGLTYPEIARRLEVSLSSVQQYMVRAMTACYAAFDD
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttccaccctcctgtccgcatcggccgcgcgcaccgacccttccgccgcgcccgtc
gatggcctgtaccgcgatcatcgctcctggctgttcggctggctgcgccgcaggctgggc
tgcgagcaccgcgccgaagacctggcgcaggacgtgttcctgcgggtgatccagggccgc
aaggcggtgcgcgccgccgaagcgcgcgggctgctgaccaccattgccaagggtctggta
gtggaccaccagcggcatgcggccttggaacgggcctatctcgcctatctggccgccatt
cccgaggcctatgcgccatcccccgaggaacaaaccgagcagctgcaatcgctggcgcgg
ctggaccgtctgctggacggcctgccgcccaaggcccgatccgcgttcctgctgtcgcag
ctcgacgggctgacctatcctgagatcgcccggcggctcgaggtttccttgagttcggtg
cagcaatacatggtgcgcgccatgaccgcgtgctacgcggcctttgatgactag
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