Achromobacter aegrifaciens: RA224_25040
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Entry
RA224_25040 CDS
T09343
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RA224_25040 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaeg03019
]
RA224_25040 (rnc)
03009 Ribosome biogenesis [BR:
aaeg03009
]
RA224_25040 (rnc)
03036 Chromosome and associated proteins [BR:
aaeg03036
]
RA224_25040 (rnc)
Enzymes [BR:
aaeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RA224_25040 (rnc)
Messenger RNA biogenesis [BR:
aaeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RA224_25040 (rnc)
Ribosome biogenesis [BR:
aaeg03009
]
Eukaryotic type
90S particles
RNase
RA224_25040 (rnc)
Prokaryotic type
rRNA processing factors
RA224_25040 (rnc)
Chromosome and associated proteins [BR:
aaeg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RA224_25040 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WLW60466
LinkDB
All DBs
Position
complement(5370857..5371618)
Genome browser
AA seq
253 aa
AA seq
DB search
MSLATLENRLDHHFSDPALLEQALTHRSHGARHNERLEFLGDSVLNFVVAAMLFERYSKI
DEGDLSRLRANLVKQASLADIAQRLELSQYLRLGEGELKSGGFRRPSILADTVEALFGAV
FLDAGFDAARRVIVRQYQPVLASVDPKTLGKDAKTLLQEFLQGRKLALPVYTVVATHGAA
HSQQFEVECAIPALEIKVMAPGASRRAAEQSAAKLALEAALAVSPATKAARKSGKARKTA
QLSLPVAVAQETK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctagccacgctagaaaaccgcctggaccaccacttcagtgatccggcattgctc
gaacaggcgctgacgcatcgcagccacggcgcgcgccacaacgagcgcctggaattcctc
ggggattccgtgctgaacttcgtcgttgcagcgatgctgttcgagcgttattccaaaatc
gacgaaggcgacttgtcgcgcctgcgggccaatctggtgaagcaggcctcgctggcggat
atcgcccagcggctggaactgtcgcagtatctgcgcctgggcgagggcgaattgaagagc
ggcggtttccgccgtccttcgatcctggccgacacggtcgaggccctgttcggcgccgtg
ttcctggatgcaggcttcgacgccgcccgccgcgtgatcgtgcgccagtaccagccggtg
ctggcctcggtcgatcccaagaccctgggcaaggacgccaagactttgctgcaggaattc
ctgcagggccgcaagctggcgctgccggtgtacacggtggtcgccacgcatggcgcggcc
catagccagcagttcgaagtcgagtgcgccattccggcgctcgagatcaaggtgatggcg
cctggcgccagccgccgcgccgccgagcaatcggcggccaagctggcgctggaggccgcg
ttggccgtcagcccggcgaccaaggctgcccgcaagtcgggcaaggcgcgcaaaaccgcg
caattgtcgctgccggtggcagtggctcaagagactaaatga
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