Achromobacter aegrifaciens: RA224_26625
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Entry
RA224_26625 CDS
T09343
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RA224_26625 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaeg03019
]
RA224_26625 (pnp)
03016 Transfer RNA biogenesis [BR:
aaeg03016
]
RA224_26625 (pnp)
Enzymes [BR:
aaeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RA224_26625 (pnp)
Messenger RNA biogenesis [BR:
aaeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RA224_26625 (pnp)
Transfer RNA biogenesis [BR:
aaeg03016
]
Prokaryotic type
tRNA degradation factors
RA224_26625 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
WLW60770
LinkDB
All DBs
Position
complement(5706342..5708504)
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVVVSIEDTVVLATVVASKKAKPGQTFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVIHTLSV
NPEIDPDIPAMIGASAALAISGIPFNGPIGAARVGYIDGQYAINPTASQLKSSKLDLVVA
GTENAVLMVESEADQLSEEIMLGGVVYGHQQMQAVINAIHELVKDAGKPDWDWQAPAKDE
ALIAAVTAAAQEGLNAAYQIREKQARTTKLREVSADVSAKLAAAAAEKGEAAPDAVAVDN
IMFSLESAIVRGQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMLHYNMPPFATGETGRIGVPKRREIGHGRLAKRALIPLL
PAPEDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMKEALDGSRGELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQIYEGAVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEQQQSAAAPEAAPQSEPQAE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaagtgacaaaatcgttccagtacggccagcacacggtcgtcctggaaact
ggcgagatcgctcgccaggcctccggcgccgttgtggtgtcgatcgaggacaccgtcgtc
ctggccaccgtcgtggcttccaagaaggccaagccgggtcaaacgtttttcccgctgacc
gttgactacatcgagaagacctacgccgccggccgcatcccgggtggcttcttcaagcgc
gaaggcaagccctccgagaaggaaacgctgacctcgcgcctgatcgaccgtcccctgcgt
ccgctgttccccgaagacttctacaacgaagtccaggtggtcatccatacgttgtcggtc
aatcctgaaatcgatcccgacatccccgccatgatcggcgcctcggccgcgctggccatc
tcgggcatcccgttcaacggcccgatcggcgccgcgcgcgtgggctacatcgatggccag
tacgccatcaacccgaccgcctcgcagctgaagtcgtccaagctggacctggtcgtcgcc
ggcaccgaaaacgccgtgctgatggtggaatccgaagccgaccagctgtccgaagaaatc
atgctgggcggggtggtctacggccaccagcaaatgcaggccgtcatcaacgccattcac
gaactggtgaaggacgccggcaagcccgattgggactggcaagcgcccgccaaggacgaa
gccctgatcgccgcggtcaccgccgctgcccaggaaggcctgaacgccgcctaccagatc
cgcgaaaagcaggctcgtaccaccaagctgcgcgaagtgtcggctgacgtgtcggccaag
ctggctgccgccgccgccgaaaagggcgaagcggcgccggacgccgttgctgtcgacaac
atcatgttctcgctggaatccgccatcgtgcgcggccagatcctgaacggcgagccccgc
atcgacggccgcgacacccgcaccgtgcgtcccatcagcgtgcgtctgggcgtgctgccc
cgcgcacacggcagcgcgctgttcacccgtggtgaaacccaggcgctggtcgtggccacg
ctgggcaccaagcaggatgagcagatcatcgacgcgctcatgggcgagtaccgcgaccgc
ttcatgctgcactacaacatgcctccgttcgccaccggcgaaacgggccgcatcggtgtg
cccaagcgccgcgaaatcggccacggccgcctggccaagcgcgcgctgatcccgctgctg
ccggctccggaagacttccagtacaccatccgcatcgtctcggaaatcaccgagtccaac
ggctcgtcgtcgatggcttcggtctgcggcggctcgctggccatgatggacgccggcgtg
ccggtcaaggatcacgtggccggcgtggccatgggcctgatcctggacggtggcaagttc
gccgtgctgacggacatcctgggcgacgaagatcacctgggcgacatggacttcaaggtt
gcgggcaccgagaacggcgtcaccgcactgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaagtggcgctggctcaggcccgcgaaggccgcctgcacatcctgggc
aagatgaaggaagcgctggacggttcgcgcggcgagctctcggctttcgctccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacc
atccgcgcgctgaccgaagaaaccggcacgcagatcgacatctccgacgacggcacgatc
gtgatcgccagcgtcgacgaagcgcaggccaaggaagcccagcgccgcatcgtcgaactg
accgccgacgtcgaagtgggccagatctacgaaggcgccgtgctgcgcctgctggatttc
ggcgccatcgtgcaagtgctgccgggccgcgacggcctgctgcacatctcggaaatcgcc
aactaccgcatcgccaacatcaacgatgtgctgaaggtcggccagcaagtccgcgtcaag
gtcatcgaggccgacgacaagggccgcctgcgcctgtccatcaaggccatcggcggcatc
gagcagcagcaatccgctgcggcccccgaagccgccccgcaatcggaaccgcaagctgaa
taa
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