Achromobacter aegrifaciens: RA224_28445
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Entry
RA224_28445 CDS
T09343
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg00470
D-Amino acid metabolism
aaeg00550
Peptidoglycan biosynthesis
aaeg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RA224_28445 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RA224_28445 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aaeg01011
]
RA224_28445 (murD)
Enzymes [BR:
aaeg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RA224_28445 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
aaeg01011
]
Precursor biosynthesis
Amino acid ligase
RA224_28445 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
ToxA_N
FAD_oxidored
2-Hacid_dh_C
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
WLW61118
LinkDB
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Position
complement(6100049..6101581)
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AA seq
510 aa
AA seq
DB search
MNTMETSRADAPLVLILGLGETGVAAARWCARLGARLRVADTRAEPGGLAALRESLAQSE
VEYRLGCDESFDTALLDGVSQVVLSPGLAPAQAPAADLLREAEARGIEIVGEIELFARAL
ADLAETREYRPRLLTVTGTNGKTTVTALTRQLIEASGLSAVAAGNISPAALAALMEALDA
ESLPQVWVLELSSFQLETTRSLMADAAVVLNVTQDHLDWHGSMEAYAQAKARLLKMARVA
IVNRDDPYTVDMVATLNALNVRSFGRDVPELVGDMGLELGQGVAWLVACEPNDFDEPAPP
VRRKKDAPEPVRAKGRMSRLMPVDALRIRGIHNALNALAALQLARCLDLGWGPMLRALRE
YTGEPHRAAFVRTIGGVDYINDSKGTNVGATVAALEGLGQPVVLIAGGQGKGQDFSPLIP
VVAQHARAVMLIGQDGPEIGRVLASTGVQCVTVETLRDAVRGAAELAQPGDAVLLSPACA
SLDMFRNYPHRGQVFVEEVEDLARDRGEIA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgatggaaacctcccgcgcagacgcgccgctcgtcctgatcctcggattgggc
gagacgggtgtcgccgccgctcgctggtgcgcccgcctgggcgcccgcctgcgcgtggcc
gacacgcgcgccgaaccgggcgggctggctgcgctgcgcgaatcgctggcgcaaagcgaa
gtggaataccgcttgggctgcgacgagtcgttcgacacggcgctgctggacggcgtgagc
caagtggtgctgagcccgggcttggcgcctgcccaggcgcccgcggccgatctgctgcgc
gaggccgaggcccgcggcatcgagatcgtcggcgagattgaattgtttgcgcgcgcgctg
gccgatctggctgaaacgcgcgagtaccggccgcgcctgttgaccgtgacaggtaccaac
ggcaagaccaccgttaccgcgctgacgcgccaactgatcgaagccagcggtctttcggcc
gtggcggcgggcaacatcagtcccgcggcgctggcagcgctgatggaagcgctggatgcc
gaatcgctgccgcaggtctgggtgctggagctgtccagcttccagctggaaaccacgcgc
tcgctgatggccgacgcggccgtcgtgctgaacgtcacccaggatcatctggactggcat
ggcagcatggaagcctacgcgcaggccaaggcccgcctgctgaagatggcccgggtcgcc
atcgtcaaccgcgacgatccgtacaccgtggacatggttgccacgctgaacgcgctgaac
gtgcgcagcttcggccgcgacgtgccggagctggtcggcgacatgggcctggagctgggc
cagggcgtggcgtggctggtggcctgcgaacccaatgatttcgatgaacccgcgccgccg
gtgcgccgcaagaaggacgcgcccgagccggtgcgcgccaagggccgcatgagccgcctg
atgccggtggacgccctgcgcatccgcggcatccacaatgccttgaatgcgttggctgcg
ctgcagttggcgcgctgcctggacctgggctggggcccgatgttgcgcgcgttgcgcgaa
tacacgggcgaaccgcatcgcgcagccttcgtgcgcacgatcggcggcgtcgactacatc
aacgacagcaagggcaccaacgtgggcgctaccgtcgccgcgttggaaggtctgggccag
cccgtcgtgctgatcgccggcggccagggcaagggccaggatttctcgccgctgattccg
gtggtggcgcagcacgcgcgcgccgtgatgctgattggccaggacggtcccgagatcggc
cgtgtgctggcgtcgaccggcgtgcagtgcgtgacggttgaaaccctgcgcgacgccgtg
cgcggcgccgccgagttggctcagcccggcgatgccgtgctgctgtcgcccgcctgcgcc
agcctggacatgttccgcaactatccgcaccgcggacaggtgttcgtggaagaggtcgaa
gacctggcccgcgaccgtggagagatcgcatga
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