Achromobacter aegrifaciens: RA224_28915
Help
Entry
RA224_28915 CDS
T09343
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
aaeg
Achromobacter aegrifaciens
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aaeg01011
]
RA224_28915
Enzymes [BR:
aaeg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RA224_28915
Peptidoglycan biosynthesis and degradation proteins [BR:
aaeg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RA224_28915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
LysM3_LYK4_5
HTH_28
LysM2_CERK1_LYK3_4_5
CENP-B_N
HTH_23
Sigma70_r4_2
HTH_38
Motif
Other DBs
NCBI-ProteinID:
WLW61194
LinkDB
All DBs
Position
6193962..6195380
Genome browser
AA seq
472 aa
AA seq
DB search
MNLSRLLLPLMLAVLAGCAGTKAPDSKNLTTNSQGRYIARDTSRTVDLTNPPADAWDRIR
RGFAIPNLNTDLSQQWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFV
ESAYNPTALSRAQASGLWQFVPATGQHFNLKQDWWRDERRDPIASTNAALDYLEKLFEMQ
GDWYLALASYNWGEGSVQRAMAKNEAAGQGTDYLSLNMPDETRNYVPKLQAIKNIIADPQ
RYAVALPPVGNTPYFVTVQKNSDIDLEIAAKLAEMPLDEFKALNPSFNRPVIRGDHGPTL
LLPADRVEIFNANLTNYKGDLSAWKIYHSRRGESYASIAKRFGVSEATLRQTNDIGSRQK
SASGQSLLVPGEPGTGGVQLASLATPVGALDSAPSDNKAAAPRGRAAQAPAARVASARPN
VRTHKVRQGDTLFSLAKQYGTSVDALRALNNIKGSALKVGSQLRVPGTNARG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatctatcccgactccttctgccgctcatgctggcagtcctcgccggttgcgcagga
accaaagcccccgatagcaagaacctcaccaccaattcgcaagggcgatacatcgcccgc
gacacgtcccggacggttgacctgaccaacccgcccgccgacgcctgggaccgcatccgc
cgcggtttcgccattcccaacctgaacaccgacctctcgcagcagtggaccgactactac
gcgtcccaccccgagtcggtgcagcgcatggcggaacgggccggcaagtacctgtatttc
atcgtcgacgagatcaaccgccgcggcctgccgaccgagctggcgctgctgcccttcgtc
gaaagcgcctacaacccgaccgcgctgtcgcgcgcccaggcatccggcctgtggcagttc
gtgccggccacgggccagcacttcaacctgaagcaggactggtggcgcgacgagcgccgc
gaccccatcgcctcgaccaacgcggcgctggactacctggaaaagctgtttgaaatgcag
ggcgactggtacctggcgctggcctcgtacaactggggcgaaggctcggtgcaacgcgcc
atggccaagaacgaagcggccggccagggcacggactacctgtccctgaacatgcccgac
gaaacccgcaactacgtgcccaagctgcaggccatcaagaacatcatcgccgatccgcag
cgctatgctgtggccctgcccccggtgggcaatacgccctacttcgtgacggtccagaag
aacagcgacatcgacctggaaatcgccgccaagctggcggaaatgccgctggacgaattc
aaggccctgaacccctcgttcaaccgccccgtgatccgcggcgaccacggccccaccctg
ctgctaccggccgaccgtgtcgaaatcttcaacgccaacctgaccaactacaagggcgat
ctcagcgcctggaagatctaccactcgcgccgcggcgaatcctacgcctcgatcgccaag
cgtttcggcgtgagcgaagccacgctgcgccagaccaacgacatcggttcgcgccagaaa
tccgcctccggccaatccctgctggtgccgggcgagcccggcacgggcggcgtgcaactg
gcctcgctggccacgccggtgggcgcactggactcggcgccgtcggacaacaaggctgcc
gccccgcgcggccgcgccgcccaggcgccggctgcccgcgtggccagcgcccgccccaat
gtccgcacccacaaggtgcgccagggcgacacgctgttctcgctggccaagcagtacggc
acctcggtcgacgcgctgcgcgcgctcaacaacatcaagggcagcgccctgaaggtgggc
tcgcagctgcgcgtgccgggtaccaacgcccgcggctga
DBGET
integrated database retrieval system
