Achromobacter aegrifaciens: RA224_29305
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Entry
RA224_29305 CDS
T09343
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aaeg
Achromobacter aegrifaciens
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaeg03016
]
RA224_29305
Enzymes [BR:
aaeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RA224_29305
Transfer RNA biogenesis [BR:
aaeg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RA224_29305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
WLW61267
LinkDB
All DBs
Position
6280742..6282646
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AA seq
634 aa
AA seq
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MYVFYEDDGSFKAGNILSETDASLQVESESGKRSKIKRANTLFTFASPEPAALMSQAAAT
AETLDLQFLWECAPQDEFDSPALAADYFGHAPTPVEQAALLMRLHGAPAYFHRRGKGRYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQAAESLLIRPDKNSQQWKA
LDAACAKLGKSPDRLLLELGAWPHALALHKRRFLAVNFPRGLAFPDLELPAIDRELPLSD
AEIYSVDDVTTTEIDDALSVSTLPDGRLRVGVHVAAPGITVTRDSDFDKLARARLSTVYM
PGDKIPMQPDSIIQAFSLDAGREVPALSLYVVADPETGEIIESETRLERIVVRENLRHNM
LDAQVTEASLSDPSADLPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGNP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLHQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQHNVTRTVAHVLREDLVRFANAPLVTRVGGMPELER
GTAVEIDILGMDELSLELDCRYIGEISPAVGGQE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagacgacggcagcttcaaggccggcaatatcctgtccgagacc
gacgccagcctgcaggtggaatcggaatcgggcaagcgcagcaagatcaagcgcgccaat
accttgttcaccttcgcctcgcccgaaccggccgcgctgatgagccaggcggccgcgacc
gccgaaaccctggacctgcaattcctgtgggaatgcgcgccgcaggatgaattcgattcc
cccgcgctggccgccgactacttcggccacgcgcccacgccggtggaacaggcagcgctg
ctgatgcgcctgcacggcgcgccggcgtacttccatcgtcgcggcaagggccgttaccgc
cccgccccgccggacatcctggccgccgcgctggccgccctggagaaaaagcagcgccag
gccgagcaacagcaggaatgggtcgatgaaatggctgccggacgcctgcccgagcccatc
gcccaggccgcggaatcgctgctgatccgccccgacaagaattcgcagcagtggaaggcg
ctggatgcagcctgcgccaagctgggcaagagccccgaccgcctgctgctggagctgggc
gcctggccgcacgcgctggcgctgcacaagcgccgcttcctggcggtgaacttcccgcgc
gggctggcgttcccggatctggaactgcctgccatcgaccgcgagctgccgttgtccgac
gccgaaatctattcggtggacgacgtcaccacaacggaaatcgacgacgcgctgtccgtc
tccaccctgcccgacggccgcctgcgcgtcggcgtgcacgtggcggcgccgggcatcacc
gtgacccgcgacagcgatttcgacaagctggcgcgcgcgcgcctgtccaccgtctacatg
ccgggcgacaagatcccgatgcagccggacagcatcatccaggcgttctcgctggatgcc
ggccgcgaagtgccggcgctgtccctgtacgtcgtggccgatccggaaaccggcgagatc
atcgaatcggaaacccgcctggaacgtatcgtggtgcgcgagaacctgcgccacaacatg
ctggacgcccaggtcacggaagccagcctgtccgatccgtcggccgacctgccctatggt
cattggctacgcccgctgtggaagctggcgcaggccctgtcggcgcaacgcgaaaacgtg
cgcggcaagccggaaaacaattcgcgggtggagtacagcttctacctggacggtaacccc
gacgatcccgacacgccggtacgcctggtgccgcgccagcgcaacgcgccgctggaccgc
atggtggcggaatacatgatcctggcgaacaacctctggggcggcctgctgcaccagcac
ggcgtgccgggcatctaccgttcgcaacaggcgggccgcgtgcgcatgagcacccaggcc
ctaccgcacgaggccatcggcgtaccgcaatacgcctggagcacctcgccgctacgccgc
tacgtggatctggtgaaccagtggcagttgatcgctgcggtcgaacacggcgtgtccgcc
cgcctggtcgcccctttcaagccgcgcgacgcggacctgttcgccatcatcggcgcgttc
gatgcgcaatacgcggcctgggcggagttccagagcgcaatggaacgctactggtgcctg
cgctggctgaaacagcacaacgtgacccgcaccgtggcgcacgtgctgcgcgaggatctg
gtgcggttcgcgaatgcgccgctggtgactcgggtgggcgggatgccggagctggagcgg
gggactgcggtggagatcgatattctggggatggatgagttgtctctggagctggattgc
cggtatatcggggagattagtccggctgtgggcgggcaggagtag
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