Aureococcus anophagefferens: AURANDRAFT_12283
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Entry
AURANDRAFT_12283 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aaf
Aureococcus anophagefferens
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaf03016
]
AURANDRAFT_12283
Enzymes [BR:
aaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AURANDRAFT_12283
Transfer RNA biogenesis [BR:
aaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AURANDRAFT_12283
Prokaryotic type
AURANDRAFT_12283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF4054
DUF2344
DarP
Motif
Other DBs
NCBI-GeneID:
20218155
NCBI-ProteinID:
XP_009039932
JGI:
Auran1_12283
UniProt:
F0YHR5
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
KRLPKRKLALLLGYRGANYYGLQKQSKESDLPTIELALQEALNRAGAVHEGNQGDLSKIG
WSRAARTDKRVSAARQVVSAKLEVENDDVPALLERLNGELPDDIKVFDAVRVIKGFNCKQ
SCDRRHYTYLLPTFLLAPDEAIDAAFDAVAQRLAPHRAAPTLLERLRGFLAAYVGTRKYH
NFTNKLKPTDMAAQRFIVSFTADDPTYPSGDAADGAEWVKLDVVGQSFLMHMIRKMVAV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
aagcgcctgccgaagcggaaattggcgctgctcctcggctaccgcggcgcgaactactac
ggcctccagaagcagtcgaaggagtcggacctgccgacgatcgagctcgcgctccaggag
gccctcaaccgcgccggcgccgtccacgagggcaaccagggcgacctgtcgaagatcggc
tggagccgcgccgcgcggacggacaaacgcgtgtccgcggcgcgccaggtcgtctccgcg
aaattggaggtcgagaacgacgacgtgcccgcgctcctggagcggctcaacggcgagctg
cccgacgacatcaaggtcttcgacgccgtgcgcgtcatcaagggcttcaactgcaagcag
tcctgcgaccgccgccactacacgtacctcctcccgacgttcctcctcgcgcccgacgag
gccatcgacgcggcctttgatgccgtcgcgcaacggctcgcgccgcaccgcgcggcgccg
acgctgctcgagcggctccgcggcttcctcgccgcctacgtgggcacgcgcaagtaccac
aacttcacgaacaagctcaagcccacggacatggccgcgcagcgcttcatcgtgtcgttc
acggccgacgacccgacgtacccgtcgggcgacgcggccgacggcgccgagtgggtcaag
ctcgacgtcgtcggccagtccttcctcatgcacatgatccgcaagatggtcgccgtc
DBGET
integrated database retrieval system
