KEGG   Aureococcus anophagefferens: AURANDRAFT_19081
Entry
AURANDRAFT_19081  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURANDRAFT_19081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aaf03041]
    AURANDRAFT_19081
Spliceosome [BR:aaf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    AURANDRAFT_19081
SSDB
Motif
Pfam: PRP38 UreF DUF5691
Other DBs
NCBI-GeneID: 20219085
NCBI-ProteinID: XP_009032261
JGI: Auran1_19081
UniProt: F0XVG8
LinkDB
Position
Unknown
AA seq 161 aa
MVLHGNQETFNLNPLLANCILNHEYSRVLWEMGPSFDKLVAEARTKVTHVEPWQRGTSRT
PSTAFCIVMRLFQLNLHEGHVRALLDQRDAPWVRCVGFLYLRYVCPPGDLWKWCEDVLLD
DGAAPVEPRGDVSLSQWLRGLLTDQKYFGTILPRIPLKIER
NT seq 483 nt   +upstreamnt  +downstreamnt
atggtgctccacggcaaccaggagacgttcaacctgaacccgctgctggcgaactgcatc
ctcaaccacgagtactcgcgggtcctgtgggagatgggcccgtcgttcgacaagctcgtc
gccgaggcgcggaccaaggtcacgcacgtcgagccctggcagcggggcacgtcccggacg
ccgtcgacggccttctgcatcgtcatgcgcctcttccagctgaacctgcacgagggccac
gtccgcgcgctgttggaccagcgcgacgcgccctgggtccggtgcgtcggcttcctctac
ctccgctacgtctgcccgcccggcgacctctggaagtggtgcgaggacgtgctcctcgac
gacggcgcggcgcccgtggagccccggggcgacgtgagcctctcgcagtggctccggggc
ctgctcacggaccaaaagtacttcgggaccatattgccgcgcatcccgctgaagatcgag
cgc

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