Aureococcus anophagefferens: AURANDRAFT_19281 Help Entry AURANDRAFT_19281  CDS       T04134                                  Name (RefSeq) hypothetical protein   KO K15542   polyadenylation factor subunit 2 Organism aaf  Aureococcus anophagefferens Pathway aaf03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:aaf00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     AURANDRAFT_19281  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aaf03019]     AURANDRAFT_19281 Messenger RNA biogenesis [BR:aaf03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage and polyadenylation specificity factor (CPSF) complex      AURANDRAFT_19281 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st ASA1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_SPT8 WD40_MABP1-WDR62_1st CFAP251_N WD_LRWD1 PAC11 Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_WDR11_1st MIOS_WD40 WDR54 PROPPIN Beta-prop_DCAF12 Beta-prop_ACSF4 Motif Other DBs NCBI-GeneID:  20219110 NCBI-ProteinID:  XP_009032631 JGI:  Auran1_19281 UniProt:  F0XW64 LinkDB All DBs Position Unknown AA seq 389 aa AA seqDB search MPTPRSGCDVPRRLVCDTIAHQSLNKVRFPVNALSWARDGRRAVTANQNGEFTLWNGQAF NFEGLIAAHNTAVRSLAWSRSGTTMISGDTKGAIKYWESTMTPMKEILGTHQGQAVRGLD FAPSDAKFCSCADDGTVRIWDWELFQEERILAGHGWDVKTCAWHPSYQLIASGSKDNQVK MWDPRKRSCVATLYGHKHTVMKVLWNAVDANWLLTASRDHTLKLYDIRVLKNAETFKGHN REVTSIAWHPFNRRVFCSGAYDGRVNHWLVGCDAPLHSHYAHEQAIWDMDFHPVGHVLAT ASNDHRVKFWVRARPGDDVERDLDGAQKTLVQDRADSIGYVPPAVDEEQLALDNAPRGFN PGFETGGGRYGPDARFGGGGGRPGGGGFS NT seq 1170 nt NT seq  +upstreamnt  +downstreamnt atgccgacgccgcggagcggctgcgacgtgccgcggcgcctcgtctgcgacacgatcgcg caccagtcgctgaacaaggtgcgcttccccgtgaacgcgctgagctgggcgcgcgacggc cggcgggcggtgacggcgaaccagaacggcgagttcacgctgtggaacggccaggccttc aacttcgagggcctcatcgccgcgcacaacacggccgtgcggtccctggcctggagccgg tccggcacgacgatgatctccggcgacacgaagggcgcgatcaagtactgggagagcacg atgacgccgatgaaggagattttaggcacgcaccagggccaggccgtgcgcggcctggac ttcgcgccgtccgacgccaagttctgctcctgcgcggacgacggcacggtgcgcatctgg gactgggagctcttccaggaggagcggatcctcgcgggccacggctgggacgtgaagacg tgcgcctggcacccgtcctaccagctcatcgcgtcgggctccaaggacaaccaggtgaag atgtgggacccgcggaagcggtcctgcgtcgcgaccttgtacggccacaagcacacggtc atgaaggtgctctggaacgccgtcgacgcgaactggcttttgacggcgtcgcgcgaccac acgctcaagctctacgacatccgcgtgctcaagaacgcggagaccttcaagggccacaac cgcgaggtcacgtccatcgcctggcaccccttcaaccgccgcgtcttctgcagcggcgcg tacgacggccgcgtgaaccactggctcgtcggctgcgacgcgccgctccactcgcactac gcgcacgagcaggccatctgggacatggacttccaccccgtgggccacgtcctcgcgacg gcgtccaacgaccaccgcgtcaagttctgggtccgggcccggccgggcgacgacgtcgag cgcgacctcgacggcgcgcagaaaacactcgtccaggaccgcgcggactcgatcggctac gtcccgccggccgtcgacgaggagcagctcgccctcgacaacgcgccgcgcggcttcaac ccgggcttcgagaccggcggcggccgctacggcccggacgcgcgcttcggcggcggcggc ggccggcccggcggcggcgggttctcctaa

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