Aureococcus anophagefferens: AURANDRAFT_19888
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Entry
AURANDRAFT_19888 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURANDRAFT_19888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aaf03041
]
AURANDRAFT_19888
Spliceosome [BR:
aaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
AURANDRAFT_19888
Complex C
U4/U6.U5 tri-SnRNP related factors
AURANDRAFT_19888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
20219203
NCBI-ProteinID:
XP_009033389
JGI:
Auran1_19888
UniProt:
F0XXJ0
LinkDB
All DBs
Position
Unknown
AA seq
266 aa
AA seq
DB search
MANRSDPMAQEVHGTNPQRIVEKILRMKVYATQYWKEYCFGLTAETLVDRAIEIDHVGGT
YGGIRKPTKFMCLLLKMLQIQPDLEIIVEFIKNEEYKYVRALGALYLRCVGRPPEVYKYL
EPLYVDYSKLRVRTFEGWTITHVDEFVDELLTEDYSCDIALPHLPKRWHLEQQNLLGPRT
NNADGLDDDDDDDASSASSERSAKKPERGRLASRECEQRSAPSPSSSRARRSSRARGSCP
RARSTCPRTSRRRPTRSTSRSRRRSA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcagcgaccccatggcccaggaggtgcacgggacgaacccgcagcgcatc
gtggagaagattctgcgcatgaaggtctacgcgacgcagtactggaaggagtactgcttc
ggcctcacggcggagacgctcgtcgaccgggccatcgagatcgaccacgtcggcggcacg
tacggcggcatccgcaagccgaccaagttcatgtgcctgctcctgaagatgctccagatc
cagccggacctggagatcatcgtcgagttcatcaagaacgaggagtacaagtacgtgcgc
gcgctcggcgcgctctacctccggtgcgtcggccggccgccggaggtctacaagtacctc
gagccgctctacgtcgactactccaagctccgcgtgcgcaccttcgagggctggacgatc
acgcacgtcgacgagttcgtcgacgagctcctcaccgaggactactcgtgcgacatcgcg
ctgccgcacctcccgaagcggtggcacctcgagcagcagaacctcctgggcccgcggacg
aacaacgccgacggcctcgacgacgacgacgacgacgacgcgtcgagcgcgtccagcgag
cggagcgcgaagaagcccgagcgcgggcgcctcgccagccgcgaatgcgaacagcgcagc
gcgccgagtccgtcgagctcccgggctcgtcgctcgtcgagggcgcggggctcgtgcccg
cgggcgcgaagcacgtgtccgaggacctcgcggcgaagacccacacgttcgacgtcacga
tcacggcgccgctcggcctga
DBGET
integrated database retrieval system