Aureococcus anophagefferens: AURANDRAFT_20224
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Entry
AURANDRAFT_20224 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03030
DNA replication
aaf03410
Base excision repair
aaf03420
Nucleotide excision repair
aaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AURANDRAFT_20224
03410 Base excision repair
AURANDRAFT_20224
03420 Nucleotide excision repair
AURANDRAFT_20224
03430 Mismatch repair
AURANDRAFT_20224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaf03032
]
AURANDRAFT_20224
03400 DNA repair and recombination proteins [BR:
aaf03400
]
AURANDRAFT_20224
DNA replication proteins [BR:
aaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AURANDRAFT_20224
DNA repair and recombination proteins [BR:
aaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AURANDRAFT_20224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_assoc_2
AAA_30
AAA_22
nSTAND3
AAA_16
PBP1_TM
AAA_5
AAA_33
Rad17
RuvB_N
Motif
Other DBs
NCBI-GeneID:
20219254
NCBI-ProteinID:
XP_009033456
JGI:
Auran1_20224
UniProt:
F0XZ23
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MDIRSFFKPKPGQEKKKASSSPKPPTPKKAASPKKAASPAKKSPAKRKAPSPAPAPPAKA
PTPKKKEFAAAEEKKVAVLRGFPALEALAAESAAAVAAAGGAKPKPPKAAPAAPRAAAVS
GLWADRHKPKSQKDILGNGDVCKKLGLWLDDWEKVHLGDEKKRKKPAFAKENPGAKAALL
SGPPGIGKSSMAALLCAARGFDVVELNASDTRSARTVEETLGDALGCQVVSSSFAKKGAA
PPSKKRLRRVVIMDEIDGLSGSDRGGSQALVKLIKSSSTPIICICNDRQSAKVKTLANHC
FDLRFKRPMKVTIAKRVMAIAMKEGLTIEQNAAELLVESCGNDIRQCLNALQMWATSEGE
AETCSYTAMKDRLSTISKDAIQRVTPFDGAKIILSDVRRKSHFDRCDAFFTDYSLVPLLV
QHNYVTAASAARDAQGKPCSVDEKLNRLEAAAACLSDVDLIDRRVHADQEWGLLTTEASL
TVRAGVLVDGSCMAPQFSAWFGKNSTTKKSKRQCGELALHLGSRISGTRDAVRRDYLPML
AKYVTRPLVDGGAAGVAETIARLDEYGLSKDDLFETLPDLQLGGAKVPGLDALDTKVKTH
FTKTYNAGTHGSQALQPQNLVAKKKKRKADDDAPGVARDDDDYVDDDDDEEDLDVSMFSK
KKKKKAPAKKAPAKKAPAARKPAAKKSKKG
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggacatccgcagcttcttcaagcccaagccgggccaggagaagaagaaggcgtcttca
tccccgaagccgccgacgccgaagaaggccgcgtcgccgaagaaggccgcgtcgccggcg
aagaagtcgccggccaagcgcaaggcgccgtcgccggccccggcgccgccggccaaggcg
ccgacccccaaaaagaaggagttcgccgccgcggaggagaagaaggtcgccgtgctccgg
ggctttcccgcgctcgaggccctggcggcggagtcggcggccgcggtcgccgcggccggc
ggcgcgaagcccaagccgcccaaggccgcgccggcggcgccgcgggccgcggccgtgtcg
ggcctctgggcggaccgccacaagcccaagagccagaaggacatcctcggcaacggcgac
gtctgcaagaagctcggtttgtggctcgacgactgggagaaggtgcacctcggcgacgag
aagaagcgcaagaagcccgccttcgccaaggagaacccgggcgccaaggccgcgctgctg
agcgggccgccgggcatcggcaagagctccatggccgcgctgctctgcgccgcgcgcggc
ttcgacgtcgtcgagctcaacgcgtcggacacgcggtccgcgcggaccgtcgaggagacg
ctcggcgacgccttgggctgccaggtcgtgtcgtcgtccttcgcgaagaagggcgccgcg
ccgccgtcgaagaagcgcctccgccgcgtcgtcatcatggacgagatcgacggcctcagc
ggcagcgaccgcggcgggtcccaggccctcgtcaagctcatcaagtcgtcgtcgacgccc
atcatctgcatctgtaacgaccgccagtccgccaaggtcaagaccctcgcgaaccactgc
ttcgacctccgcttcaagcggcccatgaaggtcacgatcgcgaagcgcgtcatggccatc
gcgatgaaggaggggctgaccatcgagcagaacgccgcggagctgctcgtcgagtcctgc
ggcaacgacatccgccagtgcctcaacgcgctgcagatgtgggcgacgtccgagggcgag
gcggagacgtgctcctacaccgcgatgaaggaccggctctcgacgatctccaaggacgcg
atccagcgcgtgacgcccttcgacggcgccaagatcatcctcagcgacgtgcggcgcaag
tcccacttcgaccgctgcgacgcgttcttcacggactactcgctcgtgccgctgctcgtg
cagcacaactacgtgacggccgcgtccgcggcgcgcgacgcccagggcaagccctgctcc
gtcgacgagaagctgaaccgcctcgaggccgcggcggcgtgcctcagcgacgtcgacctc
atcgaccgccgcgtccacgcggaccaggagtgggggctgctgacgacggaggcgtcgctc
acggtccgcgcgggcgtgctcgtcgacggctcctgcatggcgccccagttcagcgcctgg
ttcggcaagaactcgacgacgaagaagtcgaagcgccagtgcggcgagctcgcgctccac
ctcggctcgcgcatctcgggcacgcgcgacgccgtccgccgcgactacctgcccatgctc
gcgaaatacgtcacgcggcccctcgtcgacggcggcgccgcgggcgtcgcggagaccatc
gcgcgcctcgacgagtacggcctctccaaggacgacctcttcgagacgctcccggacctc
cagctcggcggcgccaaggtcccgggcctcgacgcgctcgacaccaaggtcaagacccac
ttcacgaagacctacaacgcgggcacgcacggctcccaggcgctccagccccagaacctc
gtcgccaagaagaagaagcgcaaggccgacgacgacgcgccgggcgtcgcgcgcgacgac
gacgactacgtcgacgacgacgacgacgaggaggacctcgacgtgtccatgtttagcaag
aagaagaagaagaaggcgcccgcgaagaaggcgcccgcgaagaaggcgcccgcggcccgg
aagcccgcggccaagaagtcgaagaagggctag
DBGET
integrated database retrieval system
