Aureococcus anophagefferens: AURANDRAFT_2169
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Entry
AURANDRAFT_2169 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03013
Nucleocytoplasmic transport
aaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AURANDRAFT_2169
03015 mRNA surveillance pathway
AURANDRAFT_2169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_2169
Enzymes [BR:
aaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURANDRAFT_2169
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AURANDRAFT_2169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
TniB
Motif
Other DBs
NCBI-GeneID:
20219472
NCBI-ProteinID:
XP_009038124
JGI:
Auran1_2169
UniProt:
F0YCL5
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
TSELVAARSWEDLHLDPSLLKGVYLANFAKPFKIQEAALPLILSGFRKAPVRENLLAQAK
SGSGKTAAFVLGMLENVDLRSPATQALCVCPTRELAQQNAAVTRNIGKVLIEEKGLVVAL
ALSDNAGKGAGGRGRGRAPKEPVVGHIVVGTPGRTLQLIKTRQLKTQGITMLVLDEADEM
DMRGHRDDTRSLRKALPDPCQVLCFSATYTDEVCRDIEASVFKRHPSSKVLIANAKDDDR
SELMVREIAHVWCDAKEHPGGKLGIVEDIYDLLSAQQSIIFVNTRKDVHHIASVLTAKNF
SVEDLTGGRGAGGMDSAERDRVMAAFRDGKVKVLITTNVIARGIDVPGVNIVINYDLPTI
IDYSVPRGASSKPPEADFDTYIHRVGRTGRAGAKGVAINLVD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
acgagcgagctcgtcgccgcgcggtcctgggaggatctgcatttggacccgagcctgctc
aagggcgtgtacctcgcgaactttgcaaagcccttcaagatccaggaggcggcgctgccg
ctcatcctcagcgggttccgcaaggcgcccgtgcgcgagaacctgctcgcccaggcgaag
agcggcagtggcaagacggccgcgttcgtgctcggcatgctcgagaacgtcgacctccgg
tcgccggcgacgcaggcgctctgcgtctgcccgacgcgcgagctcgcgcagcagaacgcc
gccgtgacgcgcaacatcggcaaggtcctcatcgaggagaagggcctcgtcgtggccctg
gccctgagcgacaacgcgggcaagggcgccggcggccgcggccggggccgcgcgcccaag
gagcccgtcgtcggccacatcgtcgtcggcacgcccggccgcacgctccagctcatcaag
acgcgccagctcaagacccagggcatcaccatgctcgtcctcgacgaggccgacgagatg
gacatgcgcggccaccgcgacgacacgcggtcgctccgcaaggcgctgcccgacccctgc
caggtgctctgcttctcggcgacctacacggacgaggtctgccgcgacatcgaggcctcc
gtcttcaagcgccacccgtcctcgaaagtgctcatcgcgaacgccaaggacgacgaccgg
tccgagctgatggtgcgggagatcgcgcacgtctggtgcgacgccaaggagcacccgggc
ggcaagctgggcatcgtcgaggacatctacgacctgctgagcgcccagcagtccatcatc
ttcgtgaacacgcgcaaggacgtgcaccacatcgcgtccgtgctcaccgcgaagaacttc
tccgtcgaggatctgacgggcggccgcggcgcgggcggcatggacagcgccgagcgcgac
cgcgtcatggccgccttccgcgacggcaaggtcaaggtgctcatcacgacgaacgtcatc
gcgcgcggcatcgacgtgcccggcgtcaacatcgtcatcaactacgacctgccgacgatc
atcgactacagcgtgccccgcggcgcgtcgtccaagccgcccgaggccgacttcgacacc
tacatccaccgcgtcggccgcacgggccgcgcgggcgccaagggcgtcgcgatcaacctc
gtcgac
DBGET
integrated database retrieval system
