KEGG   Aureococcus anophagefferens: AURANDRAFT_22949
Entry
AURANDRAFT_22949  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K11098  small nuclear ribonucleoprotein F
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURANDRAFT_22949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aaf03019]
    AURANDRAFT_22949
   03041 Spliceosome [BR:aaf03041]
    AURANDRAFT_22949
   03032 DNA replication proteins [BR:aaf03032]
    AURANDRAFT_22949
Messenger RNA biogenesis [BR:aaf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     AURANDRAFT_22949
Spliceosome [BR:aaf03041]
 Complex A
  U1 snRNP components
   Sm proteins
    AURANDRAFT_22949
  U2 snRNP components
    AURANDRAFT_22949
 Complex B
  U1 snRNP components
    AURANDRAFT_22949
  U4/U6.U5 tri-snRNP components
    AURANDRAFT_22949
 Complex C
  U2 snRNP components
    AURANDRAFT_22949
DNA replication proteins [BR:aaf03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     AURANDRAFT_22949
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 20219676
NCBI-ProteinID: XP_009035231
JGI: Auran1_22949
UniProt: F0Y495
LinkDB
Position
Unknown
AA seq 98 aa
MSIVNPKPFLNDLTGKNVLVKLKWGMEYEGKLLSVDSYMNVQLGDTKEYIDGEMAGELGA
RPAPAFSSPTDHKREVLIRCNNVMYLRKAPEAAAPMET
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtccatcgtcaacccgaagccgttcctcaacgacctcacggggaagaacgtgctggtc
aaactcaagtggggcatggagtacgagggcaagctcctctccgtcgactcctacatgaac
gtgcagctcggcgacacgaaggagtacatcgacggcgagatggcgggcgagctcggcgcg
cggccggcgcccgccttttcgtcgcccacggatcataaacgtgaggtgctcatccgatgt
aacaacgtcatgtacctgaggaaagcgccggaggccgccgcgccgatggagacgtag

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