Aureococcus anophagefferens: AURANDRAFT_25096
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Entry
AURANDRAFT_25096 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AURANDRAFT_25096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaf03400
]
AURANDRAFT_25096
DNA repair and recombination proteins [BR:
aaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AURANDRAFT_25096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_27
Motif
Other DBs
NCBI-GeneID:
20220006
NCBI-ProteinID:
XP_009036258
JGI:
Auran1_25096
UniProt:
F0Y6Q0
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MREARGAIDDAHEAVNRAVDDCDAVGARGYKAGGERAKWPVKLDKDAARGRVFRCVRRYD
EKSLKQVRTGKDGLEILSYLKNGVYFTTEALVKACGAYQAAKGDYEQSQRALTAELVKTA
ATYAPVFARCGGALARLDALTAFATAAAFAPGGAYCRPALAAGDGAPLELKGARHPVVEH
RDGVTFIANDYALGGDAGSLVLVTGPNMGGKSTYIRGLAALAVMAQAGSLVPCEAAALPL
FDSVLARVGAGDSLTKGVSTFMAEMLEASQILHVATPRSLVIIDELGRGTSTYDGFGLAW
AISEHILLESKAKCLFATHFHELTQLADDHPGRARNRHVSAHVDDDTGKITFLYEVRDGP
CLESFGIKVAELAGFPDATLAVAKRKAADLEAPGGKQAKVAVSP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcgcgcggcgcgatcgacgacgcgcacgaggccgtgaaccgcgccgtcgac
gactgcgacgcggtgggcgcgcggggctacaaggccggcggcgagcgcgccaagtggccc
gtgaagctcgacaaggacgccgcgcgcggccgcgtcttccgctgcgtgcggcgctacgac
gagaagtcgctgaagcaagtccggacgggcaaggacggattggagatcctctcgtacctc
aagaacggcgtctacttcacgacggaggccctcgtcaaagcctgcggggcctaccaggcc
gcgaagggcgactacgagcagagccagcgggcgctcacggcggagctcgtcaagacggcc
gcgacgtacgcgcccgtcttcgcgcggtgcggcggcgcgctcgcgcgtttagacgcgctg
acggccttcgccacggccgcggccttcgcgcccggcggcgcttactgccggccggcgctg
gcggcgggcgacggcgcgccgctcgagttgaagggcgcgcggcacccggtcgtcgaacat
cgcgacggcgtcacgttcatcgcgaacgactacgcgctcggcggcgacgcgggaagcctg
gtgttggtgacgggcccgaacatgggcggcaagtcgacctacatccggggcctcgcggcc
ctggccgtcatggcgcaggcggggagcctcgtgccgtgcgaggcggcggcgctgccgctc
ttcgactccgtgctcgcgcgcgtcggcgcgggcgactcgctcaccaagggcgtgtcgacc
ttcatggccgagatgctcgaggcgtcccagatcctccacgtcgcgacgccgcggagcctc
gtgatcatcgacgagctcggccgcggcacgtcgacgtacgacggcttcggcctcgcctgg
gccatctccgagcacatcctcctcgagtccaaggccaagtgcctcttcgcgacccacttc
cacgagctcacgcagctcgcggacgaccacccgggacgagcgcggaaccggcacgtgtcc
gcgcacgtcgacgacgacacgggcaagatcacgttcctctacgaggtcagggacgggccc
tgcctcgagtccttcggcatcaaggtcgccgagctcgccggcttccccgacgcgacgctc
gccgtcgccaagcgcaaggccgcggacctcgaggcgccgggcggcaagcaggccaaggtc
gccgtgtcgccctag
DBGET
integrated database retrieval system
