KEGG   Aureococcus anophagefferens: AURANDRAFT_25503
Entry
AURANDRAFT_25503  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K15171  transcription elongation factor SPT4
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    AURANDRAFT_25503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aaf03021]
    AURANDRAFT_25503
   03019 Messenger RNA biogenesis [BR:aaf03019]
    AURANDRAFT_25503
Transcription machinery [BR:aaf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     AURANDRAFT_25503
  RNA polymerase I system
     AURANDRAFT_25503
Messenger RNA biogenesis [BR:aaf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     AURANDRAFT_25503
SSDB
Motif
Pfam: Spt4
Other DBs
NCBI-GeneID: 20220060
NCBI-ProteinID: XP_009036236
JGI: Auran1_25503
UniProt: F0Y7M1
LinkDB
Position
Unknown
AA seq 87 aa
RFFQDGCENCPFLELAERQDRVASCTTASFDGVVAMMKPEESWIARWEGINRSLPGCYAM
KLTGEMPEQIRQFLHDKRISSRVTQAE
NT seq 264 nt   +upstreamnt  +downstreamnt
aggttcttccaggacggctgcgagaactgccccttcctcgagctcgcggagcgccaggac
cgcgtcgcgagctgcacgacggcgtcgttcgacggcgtcgtcgcgatgatgaagcccgag
gagtcgtggatcgcccgctgggagggcatcaaccggagcctgccgggctgctatgccatg
aagctcacgggcgagatgcccgagcagatccgccagttcctccacgacaagcgcatcagc
tcgcgggtgacgcaggcggagtag

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