KEGG   Aureococcus anophagefferens: AURANDRAFT_25560
Entry
AURANDRAFT_25560  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
aaf  Aureococcus anophagefferens
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aaf03041]
    AURANDRAFT_25560
Spliceosome [BR:aaf03041]
 Complex B
  Other components
   Complex B specific factors
    AURANDRAFT_25560
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I LisH_TPL ANAPC4_WD40 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR75_1st LisH_WDR26 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Ge1_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_DCAF4 Beta-prop_Nup120_160 LisH Beta-prop_SCAP Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 20220067
NCBI-ProteinID: XP_009036530
JGI: Auran1_25560
UniProt: F0Y802
LinkDB
Position
Unknown
AA seq 569 aa
MAAAPLIASDIGIGSVEIDASDVVRLVLQFLKEHGLSSSAAELERESGVLVNAVEAKGRL
VGDVRSGRWDAVLPALASVELPAEAAAAVHEHACYELCDAGEGDVARELLRHKTLQKLRG
AEPERFLRLERAVGRAAATGGYGGEAPWPRGETRESRRAAVADDVAGAVGAVAPGRLVSL
LGMALRWQAHCGDLRGSGGRRVDVFRGDAGDPLSRKSEEERPPKRAAGAVRLGAGSKPLC
CAFAPDGSALITGSSDGFVELWDPASCRLRTDLPYQRDDELLMHDAPVLALAPSLDGTAL
ASGDRDGCLKVWRLATGQCARKFPKAQQQAASAGAEESAVAWSRDGSQLLTASSDGAVRS
HGLKSGRTLQQFRGHGGSVSAVAYLRSSGESSDAVVSGSADGTVRVWDPRSAETVSTFSP
PKALAKLERRAVADKERAVVAVLQQPGSESKFFVVDKSPTAVLADLRTGVAVAAFSSRDE
PAKPPSEAAHALRKPGCDFVAAALSRPRGDYLYCLGEDKVLYCFHVQSAALDRCCPIDDA
KDVVGLAVHPHRNVVASFGDGDKLLLWKS
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggccgcggcgccgctcatcgcgtcggacatcggcatcgggagcgtggagatcgacgcg
agcgacgtcgtgcgcctcgtgctccagttcctcaaggagcacggcctgagctcgagcgcc
gcggagctcgagcgggagtcgggcgtcctcgtcaacgccgtcgaggccaagggccgcctc
gtcggcgacgtgcggtccggccggtgggacgccgtgctgccggcgctcgcgagcgtggag
ctgccggcggaggcggcggcggccgtccacgagcacgcgtgctacgagctctgcgacgcc
ggcgagggcgacgtcgcgcgcgagctcctgcgccacaagacgctccagaagctccgcggc
gcggagccggagcggttcctgcgcctcgagcgggccgtcggccgcgccgcggcgacgggc
ggctacggcggcgaggcgccctggccccggggcgagacgcgcgagagccgccgcgcggcg
gtcgcggacgacgtcgccggcgccgtcggcgccgtcgcgccgggccgcctcgtgagtttg
ttgggtatggccctgcgctggcaggcgcactgcggcgacctgcgcggctccggcggccgc
cgcgtcgacgtcttccggggcgacgccggcgacccgctctcgcggaagtccgaggaggag
cggccgccgaagcgcgccgcgggcgccgtgcgcctcggcgcgggctcgaagccgttgtgc
tgcgccttcgcgcccgacgggagcgcgctcatcacgggcagctccgacggcttcgtggag
ctctgggacccggcgagttgccggctgaggacggacctgccgtaccagcgcgacgacgag
ctgctcatgcacgacgcccccgtcctcgccctggcgccgtcgctcgacggcacggcgctc
gcgagcggcgaccgcgacgggtgcctcaaggtctggcgcctggccacggggcagtgcgcg
cggaagttccccaaggcgcagcagcaggccgcgagcgccggggcggaagaaagcgcggtc
gcgtggtcccgcgacggcagccagctgctgacggcgtcgtccgacggcgccgtgcggtcc
cacggcctcaagagcggccgcacgctccagcagttccggggccacggcgggtccgtgtcc
gcggtcgcctacctgcggagctccggcgaatcgtcggacgcggtcgtctcgggctccgcg
gacggcacggtgcgcgtctgggacccgcggtccgcggagaccgtgtcgaccttctcgccg
cccaaggccctcgcgaagctcgagcggcgcgcggtcgcggacaaggagcgcgcggtcgtc
gcggtgctgcagcagccgggctccgagtccaagttcttcgtcgtcgacaagtcgccgacg
gccgtcctcgcggacctgcgcacgggcgtcgccgtcgccgcgttctcgagccgcgacgag
cccgcgaagccgccgtccgaggccgcgcacgcgctccggaagcccggctgcgacttcgtc
gcggcggcgctgagccggcccaggggcgactacctctactgcctcggcgaggacaaggtc
ctctactgcttccacgtccagagcgccgcgctcgaccgctgctgccccatcgacgacgcc
aaggacgtcgtcgggctcgcggtgcacccgcaccggaacgtcgtcgcgtcctttggcgac
ggcgacaagctcctgctctggaagtcgtaa

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