Aureococcus anophagefferens: AURANDRAFT_25751
Help
Entry
AURANDRAFT_25751 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03020
RNA polymerase
aaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AURANDRAFT_25751
09124 Replication and repair
03420 Nucleotide excision repair
AURANDRAFT_25751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaf03021
]
AURANDRAFT_25751
03400 DNA repair and recombination proteins [BR:
aaf03400
]
AURANDRAFT_25751
Transcription machinery [BR:
aaf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
AURANDRAFT_25751
DNA repair and recombination proteins [BR:
aaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AURANDRAFT_25751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
20220099
NCBI-ProteinID:
XP_009036738
JGI:
Auran1_25751
UniProt:
F0Y891
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MNAPDRIDSYVLADGEKKMVYANDEKIPNAGTFTIAKETHTVGHLLQMQVLRNNQVRYCG
YKMPHPLQNSMLVKVQTTTSKATPVAVVGAALAELQSECEVLDRSFRDAVSEKKDALARE
ERERAAARRAQGPAMY
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccggaccgcatcgattcctacgtcctcgcggacggcgagaagaagatggtc
tacgccaacgacgagaagatcccgaacgcggggacgttcaccatcgcgaaggagacgcac
accgtcggccacttgctccagatgcaggtcctgcggaacaatcaggtcaggtactgcggc
tacaagatgccccacccgctccagaactccatgctcgtcaaggtccagacgacgacgtcc
aaggcgacgcccgtcgccgtcgtcggcgccgcgctcgcggagctccagagcgagtgcgag
gtgctcgaccggtccttccgcgacgccgtctccgagaagaaggacgcgctcgcgcgcgag
gagcgcgagcgcgccgcggcgcggcgggcccaggggccggcgatgtactaa
DBGET
integrated database retrieval system
