KEGG   Aureococcus anophagefferens: AURANDRAFT_26185
Entry
AURANDRAFT_26185  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K14004  protein transport protein SEC13
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03013  Nucleocytoplasmic transport
aaf04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AURANDRAFT_26185
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AURANDRAFT_26185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aaf03019]
    AURANDRAFT_26185
   04131 Membrane trafficking [BR:aaf04131]
    AURANDRAFT_26185
Messenger RNA biogenesis [BR:aaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     AURANDRAFT_26185
Membrane trafficking [BR:aaf04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    AURANDRAFT_26185
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    AURANDRAFT_26185
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    AURANDRAFT_26185
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_SCAP CHB_HEX_C CFAP70_N
Other DBs
NCBI-GeneID: 20220169
NCBI-ProteinID: XP_009036989
JGI: Auran1_26185
UniProt: F0Y9L5 A0ABR1FQE0
LinkDB
Position
Unknown
AA seq 325 aa
MSALSPSAHIDTQHEDHIHDCQWDYYARRLATASSDRTVKVWNVEAESHALSATLTGHDG
PVWEVAWAHPQYGTVLASCSYDGTVLVFKEDGPGRWSVVHKFAPQASQPVSINSIEFAPS
AFGQLILACASSDGHVTVLRHDAATAEWGEDRFLASPLGTNAVSWAPLGVNGSTRDDGSP
ILRLATGSADCLVKVWSASAPDEHTGAVHWDAEPMADGGKLHKAWVRDVAFCPFYGVPQP
CLASCSEDKSVYVWCRGDLEMSWTPKKVVALEQPCWRVNWSVTGNILAVSSGDDDVSMWK
ETIQGEWFQLGEPEKLTNGAAAPPN
NT seq 978 nt   +upstreamnt  +downstreamnt
atgtcggccctcagcccgtcggcccacatcgacacgcagcacgaggaccacatccacgac
tgccagtgggactactacgcgcggcgcctcgcgacggcgagcagcgaccgcacggtcaag
gtctggaacgtggaagccgagagccacgcgctcagcgcgacgctgactggccacgacggc
cccgtctgggaggtggcctgggcgcacccgcagtacggcacggtgctggcgtcctgctcc
tacgacggcacggtgctcgtcttcaaggaggacgggcccggccgctggtcggtggtgcac
aagttcgccccccaggcgtcgcagcccgtgtcgataaattcgatcgagttcgcgccgtcg
gccttcgggcagctcatcctcgcctgcgcgtcgtccgacggccacgtgaccgtgctgcgc
cacgacgcggcgacggcggagtggggcgaggaccggttcctcgcgagcccgctcggcacg
aacgccgtgtcctgggcgcccctgggcgtcaacggctcgacgcgggacgacgggtcgccc
atcctgcgcctggcgacgggctccgccgactgcctcgtcaaggtctggtccgcgagcgcg
ccggacgagcacacgggcgcggtccactgggacgcggagcccatggccgacggcggcaag
ctccacaaggcctgggtccgcgacgtcgccttctgccccttctacggcgtgccccagccc
tgcctcgcgtcctgctccgaggacaagagcgtctacgtctggtgccggggcgacctcgag
atgtcgtggacgccgaagaaggtcgtcgcgctggagcagccctgctggcgcgtcaactgg
tccgtgacgggcaacatcctcgccgtcagctccggcgacgacgacgtgtccatgtggaag
gagacgatccagggcgagtggttccagctcggcgagccggagaagctcacgaacggcgcc
gcggcgccgccgaactga

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