Aureococcus anophagefferens: AURANDRAFT_26856
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Entry
AURANDRAFT_26856 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURANDRAFT_26856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_26856
03400 DNA repair and recombination proteins [BR:
aaf03400
]
AURANDRAFT_26856
Enzymes [BR:
aaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AURANDRAFT_26856
Messenger RNA biogenesis [BR:
aaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AURANDRAFT_26856
DNA repair and recombination proteins [BR:
aaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AURANDRAFT_26856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
20220267
NCBI-ProteinID:
XP_009037389
JGI:
Auran1_26856
UniProt:
F0YAC1
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MLSPEAEAALAAAEATLDAAPAPKVPARAAAPRPPVDVRALRATLKETWGYDDFREGQEA
AVAAVCGGRDCAVYWATGSGKSIVYQLAALHRARGVVLVISPLVSLMMDQVKTLNMTCGR
DVACFLGSAQTDRSVEDRALRGDYRLVYATPEKTANQDLAGALDRNCPGGLALIAVDEAH
CVSEWGHDFRPEYRRLGSVRDACPGTPLVALTATAAPRVRGDIESNLRLRPGFHVAAKTF
DRPNLALRCKRLAGEGPAAALKSTAEALRDGGATIVYCSTRGEVETATAALNALDPAAKV
AGYHAGMPPGDRRDAHYGFLSGKLHCVVATVAFGMGIDKPDIRRVVHYSPPKSMEEYYQQ
VGRAGRDGLPAECLLLFKESQL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgcccgaggcggaggccgccctcgccgcggcggaagcgaccctcgacgccgcg
ccggccccgaaggttcccgcgagggcggcggcgccgcgcccccccgtcgacgtgcgagcc
ctgcgggcgacgctcaaggagacgtggggctacgacgacttccgcgagggccaggaggcg
gccgtcgccgccgtctgcggcgggagggactgcgcggtctactgggccacgggctcgggc
aagtcgatcgtctaccagctcgcggcgctgcaccgggcccggggcgtcgtcctcgtcatc
tcgcccctcgtgtccctcatgatggaccaggtgaagacgctgaacatgacctgcggccgc
gacgtcgcgtgcttcctcgggagcgcgcagacggaccggtccgtcgaggaccgcgcgctc
cgcggcgactaccggctggtctacgcgacgccggagaagacggcgaaccaggacctcgcc
ggcgcgctggaccgcaactgccccgggggcctggcgctcatcgccgtcgacgaggcccac
tgcgtgtccgagtggggccacgacttccggcccgagtaccggcgcctcgggtccgtccgc
gacgcgtgcccgggcacgccgctcgtcgccctgacggcgacggcggcgccgcgcgtgcgc
ggcgacatcgagagcaacctgcgcctgcgcccgggcttccacgtcgccgcgaagaccttc
gaccggccgaatctggcgctgcggtgcaagcgcttggccggcgagggccccgcggccgcg
ctcaagtcgaccgcggaggcgctgcgcgacggcggcgcgaccatcgtctactgctcgacg
cgcggcgaggtcgagacggcgacggcggcgctcaacgccctggacccggcggccaaggtc
gcgggctaccacgcgggcatgccgccgggcgaccgccgcgacgcgcactacggcttcctg
agcggcaagctccactgcgtcgtcgcgaccgtggccttcggcatgggcatcgacaagccc
gacatccgccgcgtcgtccactactcgccgcccaagtccatggaggagtactaccagcag
gtcggccgcgcgggccgcgacgggctgcccgcggagtgcctgctgctcttcaaggagagc
cagctc
DBGET
integrated database retrieval system
