Aureococcus anophagefferens: AURANDRAFT_2696
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Entry
AURANDRAFT_2696 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURANDRAFT_2696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aaf03041
]
AURANDRAFT_2696
03009 Ribosome biogenesis [BR:
aaf03009
]
AURANDRAFT_2696
Enzymes [BR:
aaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURANDRAFT_2696
Spliceosome [BR:
aaf03041
]
Complex A
U1 snRNP components
U1 related factors
AURANDRAFT_2696
Complex B
AURANDRAFT_2696
Ribosome biogenesis [BR:
aaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
AURANDRAFT_2696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Consortin_C
Motif
Other DBs
NCBI-GeneID:
20220278
NCBI-ProteinID:
XP_009039644
JGI:
Auran1_2696
UniProt:
F0YGV6
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
DVIGVAKTGSGKTLGFLVPAFKQLCGNNPGPMPGQPNAPRVLVLAPTRELATQIAEECVK
FGGPLGIRSICCYGGSPKGPQLGALRSGAHVVIATPGRLNDFLEGGMVSMHNVNYLVFDE
ADRMLDMGFEPQIRKIVARCPGDRQTLFFTATCCATWPKEVRRLASEFLAEPVIIYVGDT
TGALRVNKDVCQKIFVTRGPQEKDRYLADCIRKETQAAAGGVARVIVFANAKRMCDQLER
TLPRAVGVRCAAIHGDKDQMQRTQTLNAFKVGICPVLIATDVAARGLDIKEVKAVVCYDF
PNNVEDYVHRIGRTGRAGAKGNAYTFFTQRDDRKAAQLVKLLDDAQAEVPDELRAMAQGR
GFCPSNMQFSQGGPPPPPGAYGGGGGYGGGGAYGA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
gacgtcatcggcgtcgcgaagacgggcagcggcaagacgctgggcttcctcgtgcccgcg
ttcaagcagctctgcggcaacaacccgggtcccatgcccggccagccgaacgcgccgcgc
gtgctcgtgctggcgccgacgcgcgagctcgcgacgcagatcgccgaggagtgcgtcaag
ttcggcgggcccctgggcatccgctccatctgctgctacggcggcagccccaagggcccg
cagctgggggccttgcggagcggcgcgcacgtcgtcatcgcgacgcccgggcgcctcaac
gacttcctcgagggcggcatggtgtccatgcacaacgtcaactacttggtcttcgacgag
gcggaccgcatgctcgacatgggcttcgagccgcagatccggaagattgtggcgcgatgc
cccggagaccggcagacgctcttcttcacggcgacgtgctgtgcgacgtggcccaaggag
gtgcggcgcctcgcgtcggagttcctcgcggagcccgtgatcatctacgtcggcgacacg
acgggcgcgttgcgcgtcaacaaggacgtgtgccagaagatcttcgtcacgagaggtccg
caggagaaggaccgctacctcgcggactgcatccgcaaggagacgcaggccgcggccggc
ggcgtcgcgcgcgtcatcgtcttcgccaacgcgaagcgcatgtgcgaccagctcgagcgc
acgctcccgcgggccgtgggggtaaggtgcgcggcgatccacggcgacaaggaccagatg
cagcgcacgcagacgctcaacgccttcaaggtcggcatctgccccgtgctgatcgcgacg
gacgtcgccgcgcggggcttggacatcaaggaggtcaaggccgtcgtctgctacgacttt
cccaacaacgtcgaggactacgtgcaccgcatcggccgcacgggccgcgcgggcgccaag
ggcaacgcctacaccttcttcacgcagcgcgacgaccggaaggccgcccagctcgtcaag
ttgttggacgacgcgcaggccgaggtgcccgacgagctccgggccatggcccagggccgc
ggcttctgcccctcgaacatgcagttcagccagggcggcccgcccccgccgccgggggcc
tacggcggcggcggcggctacggcggcggcggcgcctacggcgcg
DBGET
integrated database retrieval system
