Aureococcus anophagefferens: AURANDRAFT_28650
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Entry
AURANDRAFT_28650 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
aaf
Aureococcus anophagefferens
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaf03009
]
AURANDRAFT_28650
03036 Chromosome and associated proteins [BR:
aaf03036
]
AURANDRAFT_28650
Enzymes [BR:
aaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURANDRAFT_28650
Ribosome biogenesis [BR:
aaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
AURANDRAFT_28650
Chromosome and associated proteins [BR:
aaf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
AURANDRAFT_28650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
20220579
NCBI-ProteinID:
XP_009038465
JGI:
Auran1_28650
UniProt:
F0YDB9
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MLLRRAAGWTRVLGGAARPARPTLSRTFGDVARRSLVQGAEETVSGLDYAAEEGFEPPKV
RLVGEPSPAEDAAEEQADEAPAADPRLIAGREGVHAKQAAKLAQRGIDTMTEIQHLTFDA
AHAGRDVLGKSRTGTGKTLAFGLPLVERLAERAREGDYDPKKRARGPAILVLAPTRELAK
QVEAELHLLAQTHGLSTTCFHGGVSYGPQENALRRGVDVLVATVGRVIDHIDRGNLDLSD
AYHVVLDEADEMLSMGFADDVERIFSDFDLDDLLGAAPPPADAAAPLRRPQTLLFSATTP
SWVKKLTSKYLEDPELVDVVGDARQQAATTVTHKAVLVPRGPDARASLLEDIIAAAQGGG
RVIVFTSTKKECDELAGGPAFQRLAAQVLHGDIGQAQRETTLAQFRRGAFTVLVATDVAA
RGIDVKGVDLVVQYRTPRDAEGYVHRSGRTGRAGRDGTAVVLYDEREERDVRSLERLTGV
TF
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgtcgcgccgcgggatggacacgcgtcctcggaggcgcggcgcggccggcg
cggccgacgctgtcgcggaccttcggggacgtggcgcggcggtccctggtccagggcgcc
gaggagacggtgagtgggctggactacgccgccgaggagggcttcgagccgcccaaggtg
cgcctcgtcggggagccttcgcccgcggaagacgcggcggaggaacaggcggacgaggcg
cccgcggcggacccgcgcctcatcgcgggccgcgagggcgtccacgccaagcaggcggcg
aagctcgcccagcggggcatcgacacgatgacggagatccagcacctcaccttcgacgcg
gcgcacgcgggccgcgacgtcctcggcaagagccgcacgggcacgggcaagacgctggcc
ttcggcctgcccctcgtcgagcgcctcgcggagcgcgcccgcgagggcgactacgacccg
aagaagcgcgcccgcgggcccgccatcctcgtgctcgcgccgacgcgcgagctggccaag
caggtggaggcggagttgcacctcctcgcgcagacgcacgggctgtcgacgacctgcttc
cacggcggcgtgtcctacggcccccaggagaacgcgctgcgccgcggcgtcgacgtgctc
gtcgccaccgtcggccgcgtcatcgaccacatcgaccgcggcaacttggacctgtccgac
gcgtaccacgtcgtcctcgacgaggccgacgagatgctctccatgggcttcgccgacgac
gtcgagcgcatcttctccgacttcgacctcgacgacctcctcggcgccgcgccgccgccc
gcggacgccgcggccccgctccgccggccccagacgctcctcttctcggcgacgacgccg
tcctgggtcaagaagctcacgtccaagtacctcgaggacccggagctcgtcgacgtcgtc
ggcgacgcgcgccagcaggccgcgacgacggtgacgcacaaggccgtgctcgtgccccgg
ggccccgacgcgcgcgcgtcgctcctcgaggacatcatcgccgccgcgcagggcggcggc
cgcgtcatcgtcttcacctccaccaaaaaggagtgcgacgagctcgcgggcgggccggcg
ttccagcgcctcgcggcccaggtgctccacggcgacatcggccaggcccagcgcgagacg
acgctcgcccagttccgccggggcgccttcacggtcctggtggcgacggacgtcgccgcg
cgcggcatcgacgtcaagggcgtggatctggtcgtccagtaccgcacgccccgcgacgcc
gagggctacgtgcaccgcagcggccgcacgggccgcgcgggccgcgacggcacggccgtg
gtgttgtacgacgagcgcgaggagcgcgacgtccgatccttggagcggctgacgggcgtc
acgttc
DBGET
integrated database retrieval system
