Aureococcus anophagefferens: AURANDRAFT_29382
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Entry
AURANDRAFT_29382 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURANDRAFT_29382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_29382
03012 Translation factors [BR:
aaf03012
]
AURANDRAFT_29382
Enzymes [BR:
aaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AURANDRAFT_29382
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
AURANDRAFT_29382
Translation factors [BR:
aaf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
AURANDRAFT_29382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
AAA_19
ATPase
HA2_N
ResIII
AAA_30
SRP54
Motif
Other DBs
NCBI-GeneID:
20220718
NCBI-ProteinID:
XP_009038972
JGI:
Auran1_29382
UniProt:
F0YEX4
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MLRRLEEQPAARAALDDVRCRATRKGFCLEGFEDEEDAVYASLDGALLKRARGALEAAVA
ARPAPREGWAQRSGGFLSGAPGPADAAAFEAETASRGYATFLPARRRLPAFKMREAIVAA
VRSGAVTLVLGATGCGKTTQIPQFVYEDCARRGEAIAVVATQPRRISAASVAERVARERG
GALGDTVGFKIRFEDSVTASSKVVFCTVGVLLKTMQSNPLLAGATHVIVDEVHERDVHTD
FFLLLVRRLLAKRNDLKVVLMSATVDPSAFLSYFPEAAHVHASQEDGAILVFVPGWAEIA
DVVKRLEKDRSLAIHALHSRMPSAEQRAIFDAPPPGKRKVVVSTVLAETSITVEDVVHVV
DAGKARSTFLNKQSLVSALRTTWYAKANGLQRRGRAGRVRPGAWWRLYSSFQHAAMVDYA
EPEMVRSPLDELCLEVAALGLGAPEPVLAEAISPPDEKIVRAAVDGLVRLGALDAEDRMS
LSPLGRQLARLHVHPVLGKLLLLGELFDC
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgctccggcgcctcgaggagcagcccgcggcccgcgcggccctggacgacgtgcgctgc
cgggcgacgcgcaagggcttttgcctggagggcttcgaggacgaggaggacgcggtctac
gcgtccttggacggcgcgctgctcaagcgcgcgcgcggagccctggaggcggccgtcgcc
gcgcggccggcgccgcgcgagggctgggcgcagcgcagcggcggcttcctgagcggcgcg
ccggggcccgcggacgccgcggccttcgaggcggagaccgcgagccgcggctacgcgact
tttctaccggcgcggcgccgcctgcccgcgttcaagatgcgcgaggccatcgtcgccgcc
gtgcggtcgggcgccgtgacgctggttttaggcgcgacgggctgcggcaagacgacgcag
atcccccagttcgtctacgaggactgcgcgcgccgcggcgaggcgatcgcggtcgtcgcg
acgcagccgcggcgcatctcggcggcgagcgtcgcggagcgcgtcgcgcgcgagcgcggc
ggggccctgggcgacaccgtgggcttcaagatccgcttcgaggactccgtgacggcgtcg
tcgaaggtcgtcttctgcaccgtcggcgtgctgctgaagacgatgcagtcgaacccgctc
ctcgccggcgcgacgcacgtcatcgtcgacgaggtccacgagcgcgacgtgcacacggac
ttttttctcctgctcgtgcggcgcctgctggcgaagcggaacgatctcaaggtcgtgctg
atgtcggcgacggtggacccgtcggcgttcctgtcctacttccccgaggcggcccacgtc
cacgcgtcccaggaggacggcgcgattttggtcttcgtgcccggctgggcggagatcgcc
gacgtcgtcaagcgcctggaaaaagaccggtccctcgcgatccacgcgctccacagccgc
atgccctcggcggagcagcgcgccatcttcgacgcgccgccgccggggaagcgcaaggtc
gtggtgtcgacggtgctcgcggagacgtccatcaccgtcgaggacgtcgtccacgtcgtc
gacgcgggcaaggcgcggtcgacgttcctcaacaagcagagcctggtgtcggcgctgcgg
acgacgtggtacgccaaggccaacggcctccagcgccgggggcgcgcgggccgcgtgcgc
ccgggcgcctggtggcggctctattcgtcgttccagcacgcggcgatggtcgactacgcg
gaaccggagatggtgcggtcgcccctggacgagctgtgcctcgaggtcgcggcgctcggc
ctcggcgcgccggagccggtgctggcggaggcgatctcgccgccggacgaaaaaatcgtc
cgcgcggccgtcgacggcctcgtgcgcctcggcgcgctggacgccgaggaccgcatgtcc
ctgtcgcccctgggtcggcagctcgcgcggctccacgtgcaccccgtgctcgggaaactg
ctgctgctgggcgagctcttcgactgc
DBGET
integrated database retrieval system
