Aureococcus anophagefferens: AURANDRAFT_33261
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Entry
AURANDRAFT_33261 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AURANDRAFT_33261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_33261
03036 Chromosome and associated proteins [BR:
aaf03036
]
AURANDRAFT_33261
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AURANDRAFT_33261
Chromosome and associated proteins [BR:
aaf03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
AURANDRAFT_33261
COMPASS/SET1 complex (yeast)
AURANDRAFT_33261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
EIF3I
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
20221274
NCBI-ProteinID:
XP_009041267
JGI:
Auran1_33261
UniProt:
F0YLJ5
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MAAPEVSSSLNPSRFAMGAVFAGGGDESTFLAFHRLGQYCASATADGALKLIDAVNGCVK
KTVHCRKYGVAAGCFAHHEQSLLVAGAGGDSTIRHLSLYDNRYVRAFAGHDAPVTSVEPS
PADDTFLSCGADGRVVLWDLARPQAAVAALKLDRAWADRKADAALAAQAADGVVFAVGAS
SADRRDGGLVKVYDARKFEGGPFATFSLDGAAARACAEAGGGDGSVGDRFARGRWTSLEF
SPDGDKMVVATDGGAHLVFDSFEGDAKLLLEGPPQSPDFATTATFTSDGYSVVAGCEDAK
IRVWDAEKRARPAALHGHAGPVRHVACSRKYDVLASCCASAVLWLAD
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccggaggtgtcgagctcgctgaacccgagccgcttcgccatgggcgccgtc
ttcgccgggggcggcgacgagtcgacgttcctcgcgttccaccggctcggccagtactgc
gcgtccgcgaccgcggacggcgcgctgaagctcatcgacgccgtcaacggctgcgtcaag
aagacggtgcactgccgcaagtacggcgtcgccgcgggctgcttcgcgcaccacgagcag
tccctgctcgtcgccggcgcgggcggcgactcgacgatccgccacctgtcgctctacgac
aaccgctacgtccgcgccttcgcgggccacgacgcgccggtcacgtccgtcgagccgtcg
ccggccgacgacacgttcctgagctgcggcgccgacgggcgcgtcgtcctctgggacctc
gcgcggccccaggccgccgtcgcggcgctcaaattggaccgcgcgtgggccgaccgcaag
gccgacgcggcgctggccgcgcaggccgccgacggcgtcgtcttcgccgtcggcgcgtcg
tccgcggaccggcgcgacggcgggctggtcaaggtctacgacgcgcgcaagttcgagggc
gggcccttcgcgacgttttcgctcgacggcgcggccgcgcgcgcgtgcgccgaggccggc
ggcggcgacggctccgtcggcgaccgcttcgcccggggccggtggacgtccctcgagttc
tcgcccgacggcgacaagatggtcgtcgcgacggacggcggcgcgcacctcgtcttcgac
agcttcgagggcgacgcgaagctactgctcgaggggccgccgcagtcgccggacttcgcg
acgacggcgacgttcacgtccgacggctactccgtcgtcgcgggctgcgaggacgccaag
atccgcgtctgggacgcggagaagcgcgcgcggcccgcggcgctccacggccacgcgggc
cccgtgcgccacgtcgcctgctcgcggaagtacgacgtcctcgcgtcctgctgcgcgtcc
gccgtgctctggctcgcggactaa
DBGET
integrated database retrieval system
