Aureococcus anophagefferens: AURANDRAFT_35508
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Entry
AURANDRAFT_35508 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K11088
small nuclear ribonucleoprotein D3
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURANDRAFT_35508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_35508
03041 Spliceosome [BR:
aaf03041
]
AURANDRAFT_35508
03032 DNA replication proteins [BR:
aaf03032
]
AURANDRAFT_35508
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
AURANDRAFT_35508
Spliceosome [BR:
aaf03041
]
Complex A
U1 snRNP components
Sm proteins
AURANDRAFT_35508
U2 snRNP components
AURANDRAFT_35508
Complex B
U1 snRNP components
AURANDRAFT_35508
U4/U6.U5 tri-snRNP components
AURANDRAFT_35508
Complex C
U2 snRNP components
AURANDRAFT_35508
DNA replication proteins [BR:
aaf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
AURANDRAFT_35508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
20221624
NCBI-ProteinID:
XP_009043148
JGI:
Auran1_35508
UniProt:
F0YRV7
LinkDB
All DBs
Position
Unknown
AA seq
87 aa
AA seq
DB search
MSVTGKRGVGVPLILMHDGEGTIVTIECKNGDTYRGFLDETEDNMNCVLKDATRTDAKGN
KSQVEHIFLRGSQIAFFIFPNMLKKAP
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcacgggcaagcgcggcgtcggcgtgccgctcatcctcatgcacgacggcgag
ggcacgatcgtgaccatcgagtgcaagaacggcgacacgtaccgcggcttcctcgacgag
accgaggacaacatgaactgcgtgctcaaggacgcgacgcgcaccgacgccaagggcaac
aagtcgcaggtcgagcacatcttcctgcgcggctcccagatcgccttcttcatctttccg
aacatgctcaagaaggcgccc
DBGET
integrated database retrieval system