KEGG   Aureococcus anophagefferens: AURANDRAFT_35508
Entry
AURANDRAFT_35508  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURANDRAFT_35508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aaf03019]
    AURANDRAFT_35508
   03041 Spliceosome [BR:aaf03041]
    AURANDRAFT_35508
   03032 DNA replication proteins [BR:aaf03032]
    AURANDRAFT_35508
Messenger RNA biogenesis [BR:aaf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     AURANDRAFT_35508
Spliceosome [BR:aaf03041]
 Complex A
  U1 snRNP components
   Sm proteins
    AURANDRAFT_35508
  U2 snRNP components
    AURANDRAFT_35508
 Complex B
  U1 snRNP components
    AURANDRAFT_35508
  U4/U6.U5 tri-snRNP components
    AURANDRAFT_35508
 Complex C
  U2 snRNP components
    AURANDRAFT_35508
DNA replication proteins [BR:aaf03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     AURANDRAFT_35508
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 20221624
NCBI-ProteinID: XP_009043148
JGI: Auran1_35508
UniProt: F0YRV7
LinkDB
Position
Unknown
AA seq 87 aa
MSVTGKRGVGVPLILMHDGEGTIVTIECKNGDTYRGFLDETEDNMNCVLKDATRTDAKGN
KSQVEHIFLRGSQIAFFIFPNMLKKAP
NT seq 261 nt   +upstreamnt  +downstreamnt
atgtcggtcacgggcaagcgcggcgtcggcgtgccgctcatcctcatgcacgacggcgag
ggcacgatcgtgaccatcgagtgcaagaacggcgacacgtaccgcggcttcctcgacgag
accgaggacaacatgaactgcgtgctcaaggacgcgacgcgcaccgacgccaagggcaac
aagtcgcaggtcgagcacatcttcctgcgcggctcccagatcgccttcttcatctttccg
aacatgctcaagaaggcgccc

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