KEGG   Aureococcus anophagefferens: AURANDRAFT_38925
Entry
AURANDRAFT_38925  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03040  Spliceosome
aaf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURANDRAFT_38925
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AURANDRAFT_38925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aaf03041]
    AURANDRAFT_38925
   04121 Ubiquitin system [BR:aaf04121]
    AURANDRAFT_38925
   03400 DNA repair and recombination proteins [BR:aaf03400]
    AURANDRAFT_38925
Enzymes [BR:aaf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AURANDRAFT_38925
Spliceosome [BR:aaf03041]
 Complex B
  Other components
   Prp19 complex
    AURANDRAFT_38925
 Complex C
   Prp19-CDC5 complex
    AURANDRAFT_38925
Ubiquitin system [BR:aaf04121]
 Ubiquitin ligases (E3)
  U-box type E3
   AURANDRAFT_38925
DNA repair and recombination proteins [BR:aaf03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    AURANDRAFT_38925
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40 WD40_MABP1-WDR62_1st WD40_CDC20-Fz Beta-prop_EML WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_SCAP DUF6674 Beta-prop_RIG_2nd AP205_coat Cytochrom_D1
Other DBs
NCBI-GeneID: 20221919
NCBI-ProteinID: XP_009040601
JGI: Auran1_38925
UniProt: F0YJN9
LinkDB
Position
Unknown
AA seq 426 aa
MLAMFQNEWDDVMLETHVIKQQLHATRKELSHALYQHDAACRVIARLVNERDEAQRLVAE
LQRSLAGKLTSEGISSNTPNISKDGLGPEVITHLTDFWKKTSRSRKKRPVSRQLSPAETI
IGWSKKTSMELFNSNSGATDVAICQLSGAIVCAGGKSGVAWLAAASAPAATSKGCVADTC
SIIPGSASSPGTVFATSGGDKITLWKANEKDLSTVASVRVPGAASVAAHPTGSYAAIISS
NASWGLVAFGTEMSTLRELSLVMPDDPSEAPSAPLKFHPDGLILATPTTSSQGHVVRIWD
VKEQKSVHAFEGHSAPVSCVAFSENGYYMASSSIDTSVKIWDLRKLIELKTINNCDRVTA
LAFDRSGKYLAHASATRIQIHAVKEWSTLSELEVDGQIRALDFGIDAEFVAAASSKGNLD
FFGSCN
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgctagcgatgtttcaaaatgaatgggatgatgtgatgctggaaacccacgttatcaaa
caacagcttcacgcaacccgcaaagaactctcgcatgcactttaccaacacgatgcagcg
tgtcgtgtgattgcgcgtcttgtgaatgagcgggacgaggcgcagaggctcgtggccgaa
ctgcaacgcagtctcgcaggcaagctaacgtcggaaggaatctcaagcaacacaccgaat
attagcaaggatgggctaggccctgaagtcatcacgcacttgacagatttctggaagaaa
acatccaggtcacgcaagaaacgaccggtgtcaaggcaactgagccctgctgaaacaata
attggctggtcgaagaagacgtccatggaattgtttaattcaaattcgggtgcaacagat
gtcgctatttgccagctttcaggtgcaatcgtctgtgctggcggaaaatctggtgttgct
tggctcgccgcggccagtgcccctgccgccacaagtaaaggttgtgttgcggatacatgt
tccatcattccgggtagtgcatcctcaccgggcacggtatttgcaacctcaggcggcgac
aaaataactctctggaaagccaacgagaaggacctctcgaccgttgcgtctgtcagagtc
cctggcgctgcatctgtggcagctcacccaacaggaagctacgccgcaattattagcagc
aatgcaagctggggtctcgtggcgtttggcactgagatgagtacgctacgcgagctaagt
ctggtgatgcctgatgatcctagcgaagctccgtctgcaccacttaagttccacccagac
ggcctcattcttgcaacgccgacaacttcatcgcaggggcatgttgtccgtatttgggat
gtcaaagagcagaagagtgttcacgctttcgaaggtcattcggcacctgtctcgtgcgtc
gccttctcagagaatggctattacatggcctcctcttctatcgatacctccgtcaagatt
tgggaccttcgtaaactcatcgaattaaaaacgatcaataactgtgatagggtaactgcc
ctagccttcgaccgcagcggcaaatacttggctcacgcctctgctacgcgcattcaaatt
cacgcggtgaaggaatggagcacactgagtgaacttgaagtggatgggcagattcgtgcg
cttgactttggtatcgatgcagaatttgtcgcagctgcctcttccaagggcaatctcgac
tttttcggttcgtgcaactag

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