Aureococcus anophagefferens: AURANDRAFT_39132 Help Entry AURANDRAFT_39132  CDS       T04134                                  Name (RefSeq) hypothetical protein   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism aaf  Aureococcus anophagefferens Pathway aaf03040   Spliceosome aaf04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:aaf00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     AURANDRAFT_39132   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     AURANDRAFT_39132  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:aaf03041]     AURANDRAFT_39132    04121 Ubiquitin system [BR:aaf04121]     AURANDRAFT_39132    03400 DNA repair and recombination proteins [BR:aaf03400]     AURANDRAFT_39132 Enzymes [BR:aaf01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      AURANDRAFT_39132 Spliceosome [BR:aaf03041]  Complex B   Other components    Prp19 complex     AURANDRAFT_39132  Complex C    Prp19-CDC5 complex     AURANDRAFT_39132 Ubiquitin system [BR:aaf04121]  Ubiquitin ligases (E3)   U-box type E3    AURANDRAFT_39132 DNA repair and recombination proteins [BR:aaf03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     AURANDRAFT_39132 SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40 Beta-prop_WDR36-Utp21_2nd CFAP251_N WD40_MABP1-WDR62_1st WD40_CDC20-Fz Beta-prop_EML WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_1st DSE1_N EIF3I Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR75_1st zf-Nse WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C NBCH_WD40 U-box Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_NOL10_N PROPPIN Beta-prop_DCAF4 DUF6674 Beta-prop_SCAP ASA1 Beta-prop_HPS5 Beta-prop_EIPR1 PAC11 Beta-prop_RIG_2nd GPG1 Beta-prop_WDR41 Cytochrom_D1 PDCD9 Motif Other DBs NCBI-GeneID:  20221942 NCBI-ProteinID:  XP_009041163 JGI:  Auran1_39132 UniProt:  F0YL44 LinkDB All DBs Position Unknown AA seq 497 aa AA seqDB search MFCNISGEVPREPVISKTSGHVFERRLIEKSLEASKGVCPVTGNELSVSDLLPVEANLAV RPRPLTATSLPGMLAMFQNEWDDVMLETHVIKQQLHATRKELSHALYQHDAACRVIARLV NERDEAQRLVAELQRSLAGKLTSEISSNRPNISKGELDPEVITRLTDFWKKTSRSRKKRP VSRKLSPAETIIGWSKKTSMELFDSNSGATDVAICQLSGAIVCAGGKSGVAWLAAASAPA ATSKDCVADTCSIVPGSASSPGTVFVTSGGDKITLWKANEEDLSTLASVKVPGAASVAAH PTGSYAAIISSNASWGLVAFGAEMSTLCELSRVMPDNPSEAPSAPLKFHPDGLILATPTT SSQGHIVRIWDVKEQKSVHSFEGHAAPISCVAFSENGYYMASSSTDTTVKIWDLRKLTEF KTINNCDGVTALAFDRSGKYLAHASATRIQINVVKEWSTLSDLEVNGQIRALDFGIDAEF VAAASSNGYLDFFGSRN NT seq 1494 nt NT seq  +upstreamnt  +downstreamnt atgttttgcaatataagcggtgaagtgccgcgagagcccgtgatttcgaagacctcgggg cacgtttttgaaagacgattaatcgagaagtccttggaggcgtcgaaaggtgtctgccct gtcacgggcaacgaactgagtgtgtcagacttgcttccggttgaggcgaatcttgcggta cgcccgcggccgttgacagcaacgtcgctcccggggatgctagcgatgtttcaaaatgaa tgggatgatgtgatgctggaaacccacgttatcaaacaacagcttcacgcaacccgcaaa gaactctcgcatgcactttaccaacacgatgcagcgtgtcgtgtgattgcgcgtcttgtg aacgagcgggatgaagcgcagaggctcgtggccgaattgcagcgcagtctcgcgggcaag ctaacgtcagaaatatcaagtaacagaccgaatattagcaagggtgagctagaccccgaa gtcatcacgcgtttgacagatttctggaagaaaacatccaggtcacgcaagaaaagacca gtgtcgaggaaactgagccctgctgaaacaataattggctggtcgaagaagacgtccatg gagttgtttgactcaaattcgggtgcaacagatgtcgctatttgccagctttcaggtgca atcgtctgtgctggcggaaaatctggcgttgcttggctcgccgcggccagtgcccctgcc gccacaagtaaagattgtgtcgcagatacatgttccatcgttccgggtagtgcatcctca ccgggcacggtgtttgtgacctcaggcggcgacaaaataactctgtggaaagccaacgag gaggacctctcaaccctggcgtctgtgaaagtccctggcgctgcatctgtggcagctcat ccaacgggaagctatgcagcaattattagcagcaatgcaagctggggtctcgtggcgttt ggcgctgagatgagtacgctatgcgagctaagtcgggtgatgcctgataatcctagcgaa gctccgtctgcgccactcaagttccatccagatggcctcattcttgcaacgccgacaact tcatcacaggggcatattgtccgtatttgggatgtcaaagagcagaagagtgttcactct ttcgaaggacatgcggcacctatctcgtgcgttgccttctcagagaatggctattacatg gcctcctcttctaccgataccaccgtcaagatttgggacctccgtaaactcaccgaattc aaaacgatcaataactgtgatggggtaactgccctagccttcgaccgcagtggcaaatac ttggctcacgcctctgccacacgcattcaaattaacgtggtgaaggaatggagcacactg agtgatcttgaagtaaatggacagattcgtgcgcttgactttggtatcgatgcagaattt gtcgcagctgcctcttccaatggctatctcgactttttcggttcgcgcaactag

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