Aureococcus anophagefferens: AURANDRAFT_5154
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Entry
AURANDRAFT_5154 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aaf
Aureococcus anophagefferens
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaf03016
]
AURANDRAFT_5154
Enzymes [BR:
aaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AURANDRAFT_5154
Transfer RNA biogenesis [BR:
aaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AURANDRAFT_5154
Prokaryotic type
AURANDRAFT_5154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
20222120
NCBI-ProteinID:
XP_009041799
JGI:
Auran1_5154
UniProt:
F0YN09
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
GVCAVYKPPGWSSANVVAKLRGVLERAIKIPGQKKFKVKVGHGGTLDPLARGVLVVGVGR
GCREMQGYLKGAKRYRAVAELGKETDTLDAEGAVVEEAPFDHVTLDALEAALPAFTGDIR
QTPPMYSALHHEGKRLYELAREGIEVERESRPVTISRLALDDRGVGAVAGPLGLPHFGLD
VECSGGTYIRTLISDLARHEAVKSVAHMVELERTKQGPFELGDCLHEADWDFDAICQHL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ggcgtctgtgcggtctacaagccgcccggctggagcagcgcgaacgtcgtcgccaaactg
cgcggcgtgctcgagcgggccatcaagatcccgggccagaagaagttcaaggtaaaagtc
ggccacggcggcacgctcgacccgctcgcgcgcggcgtcctcgtcgtcggcgtcggccgc
ggctgccgcgagatgcagggctacctcaagggcgcgaagcgctaccgcgccgtcgccgag
ctcggcaaggagacggacacgctggacgcggagggcgccgtcgtcgaggaggcgcccttt
gaccacgtcactctggacgcgttggaggccgcgctgccggctttcacgggcgacatccgc
cagacgccgccgatgtacagcgcgctccaccacgagggcaagcgcctctacgagctcgcg
cgcgagggcatcgaggtcgagcgcgagagccggcccgtgaccatctcgaggctcgcgctc
gacgatcgcggcgtcggcgccgtcgcggggccgctcggtctgccgcacttcggcctcgac
gtcgagtgctccggcggcacctacatccgcacgctcatcagcgacctcgcgcgccacgag
gccgtgaagtccgtggcccacatggtcgagctcgagcgcacgaagcaggggcccttcgag
ctcggcgactgcctccacgaggccgactgggacttcgacgcgatctgccagcatttg
DBGET
integrated database retrieval system
