Aureococcus anophagefferens: AURANDRAFT_52680
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Entry
AURANDRAFT_52680 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K06063
SNW domain-containing protein 1
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURANDRAFT_52680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aaf03041
]
AURANDRAFT_52680
Spliceosome [BR:
aaf03041
]
Complex B
Other components
Prp19-related factors
AURANDRAFT_52680
Complex C
AURANDRAFT_52680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
20222229
NCBI-ProteinID:
XP_009034306
JGI:
Auran1_52680
UniProt:
F0Y2K4
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MSSVAPGQALSRALPTPAREYVVWKDEDKRKKSAPGTARTTAKIPGYGSRRGFVPRSLGD
FGDGGAYPEVHVAQYPLGMGTKEEARSSSTAVVALEVGEDGAVKYDAIVKQGENKGRIVQ
TSLEDVKEKEGAEDALALPSAEAEAAAAQRTQAALGAILDGKINSAKPTHVPEACDPNRQ
KATFVRYTPNPSAPGYSASASQRIVKLVDQQVDPMAPPKHKHTKIPRGPPSPPVPVPVPV
LHSPPRKVTVHDQQSWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEQTVNNDFATLAE
ALYIAERSARDDVRARAQIRNSNALREKEAQEARLRDLAASARDERAKLADRRGGAAAPR
PRDDGAAAFFGDDGDELLGGGADEDPAVAAGRAEREQVRVERKRDRERQMRLDNAKGDMK
RSRLERERDRDVSEKVALGLLKGTAKLAGEAQFDKRLFNQSSGMDSGFGDDGDYNVYSKP
LLDREDATAIYRPREADAGKYGDGDAQLADLTASSKFAAPERGFAGTAGAGPRSRDKPVQ
FEAQKEEADPFGLDAFLTDVKNKQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgtcgcgcccggccaggcgttgagccgggccctgccgacgccggcgcgcgag
tacgtcgtgtggaaggacgaggacaagcggaagaagagcgcccccggtacggcgcggacg
acggcgaagatcccgggctacgggtcgcggcggggcttcgtgccgcggtcgctcggcgac
ttcggcgacggcggcgcgtaccccgaggtccacgtcgcgcagtaccccctgggcatgggc
acgaaggaggaggcgcggtcgtcgtcgacggccgtcgtcgccctcgaggtcggcgaggac
ggcgccgtcaagtacgacgcgatcgtgaagcagggcgagaacaaggggcggatcgtgcag
acgtcgctcgaggacgtcaaggagaaggagggcgcggaggacgcgctcgcgctgccgagc
gccgaggccgaggcggcggccgcccagcgcacgcaggcggccctgggcgcgatcctcgac
ggcaagatcaactcggcgaagccgacgcacgtgcccgaggcgtgcgacccgaaccggcag
aaggcgacgttcgtgcgctacacgccgaacccgagcgcgccgggctacagcgcgtcggcc
tcccagcgcatcgtcaagctcgtcgaccagcaggtcgaccccatggcgccgccgaagcac
aagcacacgaagatcccgcgcggcccgccgagcccgccggtgcccgtgccggtgcccgtg
ctccactcgccgccgcgcaaggtcacggtccacgaccagcagtcctggaagatcccgccc
tgcgtgtccaactggaagaacgcgcggggctacaccatccccctcgacaagcgcctcgcc
gcggacggccgcggcctccaggagcagacggtgaacaacgacttcgcgacgctggcggag
gcgctctacatcgccgagcggtccgcgcgcgacgacgtgcgcgcgcgcgcgcagatccgc
aactcgaacgcgctccgggagaaggaggcccaggaggcgcggctccgcgacctcgcggcg
tccgcgcgcgacgagcgggccaagctcgcggaccggcgcggcggcgccgcggcgccgcgg
ccgcgcgacgacggcgccgcggccttcttcggcgacgacggcgacgagctgctcggcggc
ggcgccgacgaggacccggccgtcgccgcgggccgcgcggagcgcgagcaggtccgcgtc
gagcggaagcgcgaccgcgagcggcagatgcgcctcgacaacgccaagggcgacatgaag
cggagccgcctcgagcgcgagcgcgaccgcgacgtctccgagaaggtcgcgctggggctg
ctcaagggcacggcgaagctcgcgggcgaggcgcagttcgacaagcggctcttcaaccag
tcctcgggcatggacagcggcttcggcgacgacggcgactacaacgtctactcgaagccc
ctgctcgaccgcgaggacgcgacggccatctaccgcccgcgcgaggccgacgcgggcaag
tacggcgacggcgacgcgcagctcgcggatctgaccgcgtcgtccaagttcgccgcgccc
gagcggggcttcgcgggcacggcgggcgccggcccgcggagccgcgacaagcccgtccag
ttcgaggcgcagaaggaggaggcggaccccttcggcctcgacgcgttcctcacggacgtc
aagaacaagcagtag
DBGET
integrated database retrieval system
