Aureococcus anophagefferens: AURANDRAFT_54877 Help Entry AURANDRAFT_54877  CDS       T04134                                  Name (RefSeq) hypothetical protein   KO K12856   pre-mRNA-processing factor 8 Organism aaf  Aureococcus anophagefferens Pathway aaf03040   Spliceosome Brite KEGG Orthology (KO) [BR:aaf00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     AURANDRAFT_54877  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:aaf03041]     AURANDRAFT_54877 Spliceosome [BR:aaf03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     AURANDRAFT_54877  Complex C    U5 SnRNP specific factors     AURANDRAFT_54877 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB Motif Other DBs NCBI-GeneID:  20222445 NCBI-ProteinID:  XP_009040176 JGI:  Auran1_54877 UniProt:  F0YIE3 LinkDB All DBs Position Unknown AA seq 2384 aa AA seqDB search MAQPPRGPPPGMGPPPGMRPPPGMMAAMPPPGMAGFGGAPPPPPPPPAGAPARRRRKDPL SEKARKWANLQSKRFGQRRKFGFVDTYKEDMPAEHVRKIIKDHGDMSSKKFKHDKRVYLG ALKYVPHAVYKLLENLPMPWEQVRNVSVLYHVTGAISFVNEIPRVVEPIYAAQWGTMWIM MRREKRDRRHFKRMRFPPFDDEEPPLDYGDNILDVEPLEPIAMELDADDDEAVADWFYDA KPLELEPEYVNGTSYRKWTLTVPIMTTLYRLAGQLVSDLLDPNYFHLFDKRSFFTAKALN CAIPGGPKFEPLFRDADVDEDDWNEFNDINKIIIRHQIRTEYKVQYPYLYTSRPRAVKLA PYHHPPLYYVKPDDPDLPAFYFDPVVNPISAFRSRARAADDDDGGGGDDDGDDGFCLPED VGPLLADEPLYTDATAGGISLYWAPRPFNLRRGRTRRAFDVPLVNAWFKERCPPDHPVKV RVSYQKLLKCWVLNELHRKRSKPLNRKHLFRSLKATKFFQSTELDWVEVGLQVCRQGYNM LNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLTREILRLTKLVVDSVVQ YRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYRLMRQVRMCKDLKHLIYYRFNTGPVGK GPGCGFWAPGWRVWLFFMRGIVPLLERWLGNLLARQFEGRHTKGIAKTVTKQRVESHFDL ELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYV KAKADWWTNIAHYNRERIKRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLKDGPYVSA EEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKENYGINSRLNQNQREE LGLIEQAYDNPHEALSRVKRHLLTQRAFKEVGIQFMDLYSHLIPVYEVEPLEKITDAYLD QYLWYEADKRHLFPNWIKPADSEPPPLLCYKWCQGVNNLDKVWDTDAGECVVMMETKLEK VYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVTVAYKDMMHTNSYGLVRGLQFASFVFQY YGLVLDLLVLGLTRASEIAGPPQVPNEYLSYKDVSTETRHPIRLYTRYVDQVFFLLRFDA DDARDLIQRYLTEHPDPNNENVVGYNNKKCWPRDQRMRLMKHDVNLGRATFWDVKNRLPR SVTTIDWENSFVSVYSKDNPNLLFNMCGFEVRVKPKCRMHLEALAHRDGVWNLQNDATKE MTAQAFLRVDEQSLRTFENRVRQVLMSSGSTTFTKIANKWNTALIGLMTYFREAVVNTQE MLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRYS KQTDQGVTHFRSGMSHEEDQIIPNLFRYMQPWESEFVDSQRVWAEYALKRQEANAQNRRL TLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRARTDFKQYQVLRQNPFWWTHQRHDGK LWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR SGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ KIHESVTMDLCQVFDQELDALEIENVQKETIHPRKSYKMNSSCADILLFAAYKWQVAKPS LLHDTKDAYDGATSSKYWIDVQLRWGDFDSHDVERYARAKFLDYTTDNMSIYPSPTGALI AIDLAYNLYSGYGAWFPGCKPLIQQAMAKIIKANPALYVLRERIRKGLQLYSSEPTEPYL SSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIH TSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIV IKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILVLRAL HVAQDRTKVVLRPDKTVVTEPHHVWPTLSDEQWVKVEVALKDLILADYGKKNNVNVASLT QSEIRDVILGMEIAPPSLQRQQVAEIEKQAREQSQLTAVTTKTTNVHGEDMVVTTTSQYE QQSFSSKTDWRVRAISATNLHLRTHHIYVNSDDAGDGGYTYVLPKNALAKFITIADLRTQ VAGYLYGVSPPDNARVKEIRCIVVVPQVGNHQQVTLPHHLPKHDYLEDLEPLGWLHTQPN ELPQLAPQDVIAHAAVMARDESWDGEKTAVVTCAFTPGSCSLTAYKLTPAGFEWGKQHAD QAAGNPPGYAPTHYAKVQMLLSDRFLGFFMVPDDDVWNFNFMGVQHSKSMKYDLKLANPA PFYDEIHRPYHFLNFTNMEALGNDEADAPGGRAPPRPWPGKFRP NT seq 7155 nt NT seq  +upstreamnt  +downstreamnt atggcccagccgccgcgcggccccccgccgggcatgggcccgcctcccggcatgcgcccc ccgccgggcatgatggcggcgatgcccccgccgggcatggcgggcttcggcggcgcgccg ccgccgccgccgccgccgcccgcgggggccccggcccggcggcggcgcaaggacccgctc agcgagaaggcgcgcaagtgggcgaacctgcagagcaagcgcttcggccagcggcgcaag ttcggcttcgtcgacacgtacaaggaggacatgcccgcggagcacgtgcgcaagatcatc aaggaccacggcgacatgtcctccaaaaaattcaagcacgacaagcgcgtctacctcggc gcgctcaagtacgtgccgcacgcggtctacaagctcctcgagaacctgcccatgccctgg gagcaggtgcgcaacgtgtccgtgctctaccacgtcacgggcgccatctccttcgtcaac gagatcccccgcgtcgtcgagcccatctacgcggcccagtggggcacgatgtggatcatg atgcgccgcgagaagcgggaccggcgccacttcaagcgcatgcgcttcccgcccttcgac gacgaggagccgcccctggactacggcgacaacattctggacgtggagcccctggagccc atcgccatggagctcgacgcggacgacgacgaggccgtcgccgactggttctacgacgcg aagcccttagagctcgagcccgagtacgtcaacggcacgtcctaccgcaagtggacgctc accgtgcccatcatgacgacgctctaccgcctcgcgggccagctcgtgtccgacctcctc gacccgaactacttccacctcttcgacaagcggtcgttcttcaccgcgaaagctttaaac tgcgcgatccccggcgggcccaagttcgagcccctcttccgcgacgccgacgtcgacgag gacgactggaacgagttcaacgacatcaacaagatcatcatccgccaccagatccgcacc gagtacaaggtccagtacccgtacctctacacgtcgcggccccgcgcggtcaagctcgcg ccctaccaccacccgccgctctactacgtcaagcccgacgacccggacctgccggccttc tacttcgaccccgtcgtcaaccccatctccgcgttccggagccgcgcgcgcgcggccgac gacgacgacggcggcggcggcgacgacgacggcgacgacggcttctgcctgcccgaggac gtcggtcctctactcgccgacgagcccctctacaccgacgcgacggccggcggcatctcg ctctactgggcgccgcggcccttcaacctccggcgcggccggacgcggcgcgcgttcgac gtgcccctcgtcaacgcctggttcaaggagcgctgcccgccggaccaccctgtcaaggtg cgcgtctcctaccagaaactcttgaagtgctgggtcctcaacgagctccaccggaagcgg tcgaagccgttgaaccggaagcacctcttccggtcgctcaaggccacgaaattcttccag tccacggagctcgactgggtcgaggtcgggctccaggtctgccgccagggctacaacatg ctcaacctcctcatccaccgcaagaacctgaactacctccacctcgactacaacttcaac ctcaagcccgtcaaaactttgacgacgaaggagcgcaagaagagccgcttcggcaacgcc ttccacctcacgcgcgagatcctgcgcctgacgaagctcgtcgtcgactccgtcgtccag taccgcctcggcaacgtcgacgcgttccagctcgcggacgggctgcagtacatcttcgcg cacgtgggccagctgacgggcatgtaccgctacaagtaccgcctcatgcgccaggtgcgc atgtgcaaggacctgaagcacctcatctactaccgcttcaacacgggccccgtgggcaag ggcccgggctgcggcttctgggcgcccgggtggcgcgtctggctgttcttcatgcgcggc atcgtgccgctcttggagcgctggctcggcaatttgctcgcgcgccagttcgaggggcgc cacacgaagggcatcgcgaagacggtgacgaagcagcgcgtcgagtcccacttcgacctc gagctccgggccgcggtcatgcacgacatcctcgacatgatgcccgagggcgtgaaagcc aacaagtcgcggacgatcctccagcacttgtccgaggcctggcgctgctggaaggcgaac atcccctggaaggtccccggcctccccgcgcccatcgagaacatgattctacggtacgtg aaagcgaaggccgactggtggacgaacatcgcgcactacaaccgcgagcgcatcaagcgc ggcgcgacggtcgacaagacggtctgcaagaagaacctgggccgcctgacgcgcctctgg ctcaaggcggagcaggagcggcagcacaactacctgaaggacgggccctacgtgtccgcg gaggaggccgtggccatctatacgacgacggtgcactggctcgagagccgcaagttctcg ccgatccccttcccgccgctgtcctacaagcacgacacgaagctgctcattttggcgctg gagcgcctcaaggagaactacggcatcaactcgcggttgaaccagaaccagcgcgaggag ctggggctcatcgagcaggcctacgacaacccgcacgaggcgctgtcgcgcgtgaagcgc cacctgctgacgcagcgcgcgttcaaggaggtgggcatccagttcatggacttgtacagc cacctcatccccgtctacgaggtcgagccgctggagaagatcacggacgcctacctggac cagtacctgtggtacgaggcggacaagcgccacctcttcccgaactggatcaagcccgcg gactcggagccgccgccgctgctctgctacaagtggtgccagggcgtcaacaacctcgac aaggtctgggacacggacgccggcgagtgcgtcgtcatgatggagacgaagctcgagaag gtctacgagaagatcgatttgacgctgctgaaccgcttattacgcctcatcgtcgaccac aacatcgcggactacatgacggcgaagaacaacgtgaccgtggcctacaaggacatgatg cacacgaactcctacggcctggtccggggcctccagttcgcgtcctttgtgttccagtac tacggcctcgtgctcgatttgctcgtgctgggcctgacgcgcgcgtcggagatcgcgggg ccgccccaggtgcccaacgagtacctctcctacaaggacgtgtccacggagacgcgccac cccatccgcctctacacgcgctacgtcgaccaggtcttcttcttattgcgtttcgacgcg gacgacgcgcgcgacctcatccagcgctatttgacggagcacccggacccgaacaacgag aacgtcgtcggctacaacaacaagaagtgctggccgcgcgaccagcgcatgcgcctcatg aagcacgacgtcaacctgggccgcgccacgttctgggacgtgaagaaccgcctgccgcgg tccgtgacgacgatcgactgggagaactcgttcgtgtccgtctactccaaggacaacccg aacttgctgttcaacatgtgcggcttcgaggtgcgcgtcaagcccaagtgccgcatgcac ctggaagctctcgcccaccgcgacggcgtctggaacctgcagaacgacgcgacgaaggag atgacggcgcaggcgttcctgcgcgtcgacgagcagtcgctccggaccttcgagaaccgc gtgcgccaggtcctgatgtcgtccgggtcgacgacctttacgaagatcgccaacaagtgg aacacggcgctcatcggtctgatgacctactttcgggaggccgtcgtgaacacgcaggag atgctcgacctattggtgaaatgcgagaacaagatccagacgcgcatcaagatcggcctc aattccaagatgccgtcgcgcttcccgcccgtcgtcttctacacgcccaaggagctcggg gggctgggcatgctgtccatgggccacgtgctcatcccgcagagcgatttgcggtattcg aagcagacggaccagggcgtgacgcacttccggagcggcatgtcccacgaggaggaccag atcatcccgaacctgttccgctacatgcagccctgggagagcgagttcgtcgactcgcag cgcgtctgggccgagtacgcgctgaagcgccaggaggcgaacgcgcagaaccggcggctc acgctcgaggacctcgaggactcctgggaccggggcatcccgcgcatcaacacgctcttc cagaaggaccggcacacgctggcctacgacaagggctggcgcgcgcggacggacttcaag cagtaccaggtgctccgccagaacccgttctggtggacgcaccagcgccacgacggcaag ctctggaacctcaacaactaccgcacggacatgatccaggcgctgggcggcgtcgagggc attttggagcacacgctcttcaagggcacctacttccccacgtgggagggcctcttctgg gagaaggcgtcgggcttcgaggagtcgatgaagtacaagaagctcacgaacgcgcagcgg tccggcctgaaccagatcccgaaccggcgcttcacgctgtggtggtcgccgacgatcaac cgcgccaacgtctacgtcggcttccaggtgcagctcgacctcacgggcatcttcatgcac ggcaagatcccgacgctcaagatctcgctcatccagatcttccgggcccacctctggcag aagatccacgagtccgtgaccatggacctgtgccaggtcttcgaccaggagctcgacgcg ctggagatcgagaacgtgcagaaggagacgatccacccgcggaagtcctacaagatgaac tcgtcgtgcgcggacattctgctcttcgcggcctacaagtggcaggtcgccaagccgagc ctgctccacgacacgaaggacgcctacgacggcgcgacgtcgtccaagtactggatcgac gtccagctccgctggggcgacttcgacagccacgacgtcgagcggtacgcgcgcgccaag ttcctcgactacacgacggacaacatgtccatctacccgtcgccgacgggcgccctcatc gccatcgacctggcctacaacctctacagcggctacggcgcctggttcccgggctgcaag ccgctgatccagcaggcgatggcgaagatcatcaaggcgaaccccgcgctctacgtgctc cgcgagcgcatccgcaagggtttacagttgtattcgtcggaacctaccgagccctacctc tcgtcccaaaattacggcgagctcttctccaaccagatcatctggttcgtcgacgacacg aacgtctaccgcgtgacgatccacaagacgttcgagggcaacctgacgacgaagcccatc aacggcgcgatcttcatcttcaacccgcgcacgggccagctcttcctgaagatcatccac acgtccgtctgggcgggccagaagcgcctgggccagctggccaagtggaagaccgcggag gaggtcgcggcgttgatccggtctttgcccgtcgaggagcagccgaagcagatcatcgtg acgcgcaagggcatgctcgacccgctggaagtgcacctcctcgacttcccgaacatcgtc atcaaggggtcggagctgcagctgcccttccaggcctgcctcaaggtcgagaagttcggc gatctcatcctcaaggcgacggagccgcagatggtgctcttcaacatctacgacgactgg ctcaagaccatctcgtcctacacggccttcagccgcctgatcctcgtgctgcgcgcgctc cacgtcgcccaggaccggacgaaggtcgtgttgcggcccgacaagaccgtcgtcacggag ccgcaccacgtctggccgacgctctccgacgagcagtgggtcaaggtcgaggtcgccctg aaggatctgatcctggcggactacggcaagaagaacaacgtcaacgtggcgtcgctgacg cagagcgagatccgcgacgtcatcctcggaatggagatcgcgccgccgtcgttgcagcgg cagcaggtcgcggagatcgagaagcaggcgcgcgagcagagccagctgacggcggtgacc accaaaaccaccaacgtccacggcgaggacatggtcgtcacgacgacgtcccagtacgag cagcagtccttctcgtcgaagacggactggcgcgtccgcgcgatctccgcgacgaacttg cacctccgcacgcaccacatctacgtcaactccgacgacgccggcgacggcggttatacc tacgtgctcccgaagaacgcgctggccaagttcatcacgatcgccgatttacggacgcag gtcgcgggctacctctacggcgtgtcgccgccggacaacgcgcgcgtcaaggagatccgg tgtattgtggtggtgccccaggtcggcaaccaccagcaggtgacgctgccccaccacctg ccgaagcacgactatttggaggatctggaaccgctgggctggctccacacgcagccgaac gagctgccgcaattggcgccgcaggacgtcatcgcgcacgcggccgtcatggcccgcgac gagtcctgggacggcgagaagacggcggtggtgacctgcgccttcacgcccgggtcctgc tcgctgacggcctacaagctcacgcccgcgggcttcgagtggggcaagcagcacgcggac caggcggccggcaacccgccgggctacgcgccgacgcactacgccaaggtccagatgttg ttgagcgaccgcttcctcgggttcttcatggtgcccgacgacgacgtctggaacttcaac ttcatgggcgtccagcactccaagtccatgaagtacgacctcaagctcgcgaaccccgcg cccttctacgacgagatccaccggccctaccacttcctcaacttcacgaacatggaggcc ctcggcaacgacgaggccgacgccccgggggggcgggccccaccccgcccatggcccggg aaattccgcccttga

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