Aureococcus anophagefferens: AURANDRAFT_55061
Help
Entry
AURANDRAFT_55061 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURANDRAFT_55061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_55061
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURANDRAFT_55061
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AURANDRAFT_55061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF2730
Motif
Other DBs
NCBI-GeneID:
20222470
NCBI-ProteinID:
XP_009040583
JGI:
Auran1_55061
UniProt:
F0YJK4
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MSANRKLQTEIDRTLKKVEEGVEIFDEIWDKVYSATQQNQKEKYEVDLKKEIKKLQRHRD
QIKTWVASSDIKDKRPLTDARRGLIETKMEQFKVCEKETKTKTYSKEGLARETKIDPHEA
AKNSTRDWLSEKVDQLSLQIDMHEADMEKLTSGKGSKRNKQEIEQLEASIKRHRWHIARL
EQITRLLDNDALQHEQINEIKEDVEYYIDANQEPDFMDAYDETMDIFESLDLGDLPTDED
AAAANTDEKKKKKKKGDDDDDDEKDDKKKKKKDKQAEKEAKEEAKKEKKANKAKAATAMP
LTIGRATVAKAAPAPVPAAAAPIKGAKGASTTSKGMPTPGVPTPQQVAPPASGAESLANI
LKQQSAQQQQTGVAMADRLRAQQQQPTAPVPGAAFSAAAQRSQHQQQTSSLCFAPGASLE
PLLDISEHMAADDTYVRLLDAQGPSGHDDSASSASAHKLAALALSMRRAPRKADSERPRQ
YVPRNPYATPPAFPSTPASTFDDAKVFEKLGTDTLFFIFYYQQGTYQQYLAAKELKKQSW
RYHKKYMTWFQRHEEPKVTTDEFEQGTYVYFDYETGWCQRIKSDFTFEYNFLEDELVT
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaacaggaaacttcaaacggagatcgatcggactctgaagaaagtcgaggaa
ggtgtcgagatcttcgatgagatatgggacaaggtctattcggcgactcagcagaaccag
aaggagaagtatgaggtggacttgaaaaaggaaatcaagaaactccagagacaccgggat
caaatcaagacatgggttgcgtcgtcggacatcaaagacaagcgtccgctgactgacgcg
cgtcgcggtctcatcgagacgaagatggaacagtttaaggtttgcgagaaggagacaaag
accaaaacttattctaaagagggcctcgctcgcgagactaagattgacccccatgaggcg
gccaaaaatagcacgcgggattggctttcagaaaaggtagatcagctctcactgcagatc
gacatgcacgaggccgatatggaaaagctcacatcgggtaaagggtccaaacggaacaag
caagagattgaacagctcgaggcgtccattaagcgccaccggtggcacatagctcggcta
gagcagatcacacggcttctggataacgatgctctccagcacgagcaaataaatgagatc
aaagaggatgtggaatattatattgacgcgaatcaagagccagacttcatggacgcctat
gacgagacaatggatatttttgagtcacttgatctgggcgacctccccacagatgaagat
gcggccgcggccaatacagacgaaaagaagaagaagaagaagaagggagatgacgacgac
gacgacgaaaaggatgacaaaaaaaaaaaaaaaaaagacaagcaggctgaaaaggaggcg
aaagaggaagccaaaaaagaaaagaaggctaacaaggccaaggcagccacggcaatgcca
ctaacgattggtcgtgcgacagtagcgaaagcggcgcccgcgcccgtccccgctgcggct
gcgcctatcaaaggtgccaagggcgcgtctaccactagcaagggcatgccaacgcccggt
gttccgacgcctcagcaagttgctccgccggcgtctggtgccgagtcgctcgcaaacatc
ctcaagcagcagagtgcgcagcaacagcaaactggtgtcgcaatggccgacaggcttcgg
gcccagcagcaacagccaacggccccagtgcctggagctgctttttctgcagcggcgcag
cgatcacagcatcaacaacagacctccagcctctgcttcgcgcctggtgccagccttgag
ccccttcttgatatctctgaacatatggctgccgatgacacttatgtgcgcctcctcgat
gcgcagggacccagcggtcatgatgacagcgcctcaagtgcgagtgctcataagcttgcg
gcccttgcactcagcatgcgccgcgctccacgcaaggccgattcggagcgtccaaggcaa
tatgtgccccgaaatccctatgccacaccgccagcctttccttcgacgcccgcgtcgacc
ttcgacgacgcgaaggtcttcgaaaagcttggcactgacacacttttctttattttctac
tatcaacaaggaacctaccagcagtatcttgctgcaaaggaactgaaaaagcagagctgg
cgctaccacaagaagtatatgacctggttccagcgccatgaggagcctaaggtgacgaca
gacgagtttgagcaaggaacttacgtgtactttgattacgagaccggctggtgccagcgc
atcaaatccgacttcacctttgagtataattttcttgaggatgaactcgtcacctaa
DBGET
integrated database retrieval system
