Aureococcus anophagefferens: AURANDRAFT_58787
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Entry
AURANDRAFT_58787 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K14298
mRNA export factor
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AURANDRAFT_58787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_58787
03036 Chromosome and associated proteins [BR:
aaf03036
]
AURANDRAFT_58787
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AURANDRAFT_58787
Chromosome and associated proteins [BR:
aaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AURANDRAFT_58787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
VPS11_N
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
20222663
NCBI-ProteinID:
XP_009034444
JGI:
Auran1_58787
UniProt:
F0Y1R3
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MFGQPALNASNPNNDTVVPNSPSDGVSSLTFSASSQFLVASSWASTVSCWETQVAEGMGS
AQVNVAPRAQITVPAPALCTSMSADSQNVFVGLGDGTAQMWTLGQPQAQTFGKHDAPIRS
IHFVPALSCVFTGSWDKTIKCWDVRQPTPTASVQLPERCYSMDVAHPLMVVATAERKLCV
YDLSNANWQRPYRVEDSPLKHQTRCVRCFPDREGFAIGSIEGRVAIHHVDAKDAHKNFAF
KCHRDTQDGRAGQASTCNIYAVNDIAFHNLGTFATAGSDGVFNFWDKDSKQRLMAFKRAD
RPISCAAFSPAGTLYAYALSYDWSRGSESHTPTDPNTIMLHKVQKDEITQRNKKPGRK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgttcggccagcccgcgctcaacgcgtcgaacccgaacaacgacacggtggtgcccaac
tcgccgagcgacggcgtgtcgagcctcaccttcagcgcgagctcccagttcctcgtcgcg
agctcctgggcgtcgacggtgtcctgctgggagacgcaggtcgccgagggcatgggcagc
gcgcaggtgaacgtcgcgccgcgcgcgcagatcaccgtcccggcgcccgcgctctgcacg
tcgatgtcggcggactcgcagaacgtcttcgtgggcctcggcgacggcacggcgcagatg
tggaccctgggccagccccaggcccagaccttcgggaagcacgacgcgcccatccggtcc
atccacttcgtgcccgcgctctcctgcgtcttcacgggctcgtgggacaagaccatcaag
tgctgggacgtgcgccagccgacgccgacggcgtcggtgcagctcccggagcgctgctac
tccatggacgtggcgcacccgctcatggtcgtcgcgacggccgagcgcaagctctgcgtc
tacgacctttcgaacgcgaactggcagcggccctaccgcgtcgaggacagccccctcaag
caccagacgcgctgcgtgcgctgcttcccggaccgcgagggcttcgccatcgggtccatc
gagggccgcgtcgccatccaccacgtcgacgccaaggacgcgcacaagaacttcgcgttc
aagtgccaccgcgacacgcaggacggccgcgcgggccaggcgtcgacctgcaacatctac
gccgtcaacgacatcgccttccacaatttgggcaccttcgcgacggcgggctccgacggc
gtcttcaacttctgggacaaggactcgaagcagcggctcatggcgttcaagcgcgcggac
cggcccatctcctgcgcggccttcagccccgcgggcacgctctacgcctacgccctctcc
tacgactggtcccggggctccgagtcccacacgcccacggacccgaacacgatcatgctc
cacaaggtccagaaggacgagatcacgcagcgcaacaagaaaccggggcggaagtag
DBGET
integrated database retrieval system
