Aureococcus anophagefferens: AURANDRAFT_59851
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Entry
AURANDRAFT_59851 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03020
RNA polymerase
aaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AURANDRAFT_59851
09124 Replication and repair
03420 Nucleotide excision repair
AURANDRAFT_59851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaf03021
]
AURANDRAFT_59851
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_59851
03400 DNA repair and recombination proteins [BR:
aaf03400
]
AURANDRAFT_59851
Transcription machinery [BR:
aaf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
AURANDRAFT_59851
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURANDRAFT_59851
DNA repair and recombination proteins [BR:
aaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AURANDRAFT_59851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
20222862
NCBI-ProteinID:
XP_009033184
JGI:
Auran1_59851
UniProt:
F0XYC1
LinkDB
All DBs
Position
Unknown
AA seq
179 aa
AA seq
DB search
MVFFYKTDLIYEMLLHPQFFGGRMKSFIKDEIMKNVEGKCLGREGYVVAVLDVKDDDVDT
GIVDYDTGCVSVNARYSAILLRPFKNEVLDAVVTHVNELGFFTEAGPLTVFVSRHAMPPD
LQEGYDADVDSWVSDDKEVEIKTKCVVRLRLLGVMCDATQITAVGTIKDDYLGLISMGF
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcttctacaagacggacctcatctacgagatgctgctgcacccgcagttcttc
ggcgggcgcatgaagtccttcatcaaggacgagatcatgaagaacgtcgagggcaagtgc
ctcgggcgcgagggctacgtcgtcgcggtgctcgacgtcaaggacgacgacgtcgacacc
ggcatcgtcgactacgacacgggctgcgtgagcgtgaacgcgcgctacagcgccatcctg
ctgcggcccttcaagaacgaggtgctcgacgccgtcgtgacgcacgtcaacgagctcggc
ttcttcacggaggcggggccgttgacggtcttcgtgagccggcacgcgatgccgccggac
ctccaggagggctacgacgcggacgtcgactcctgggtgtccgacgacaaggaggtcgag
atcaagaccaagtgcgtcgtgcgcctgcggctcctcggcgtcatgtgcgacgcgacgcag
atcaccgccgtgggcacgatcaaggacgactacctcggcctcatctccatggggttctaa
DBGET
integrated database retrieval system
