Aureococcus anophagefferens: AURANDRAFT_60633
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Entry
AURANDRAFT_60633 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
aaf
Aureococcus anophagefferens
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_60633
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
AURANDRAFT_60633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
20223092
NCBI-ProteinID:
XP_009032313
JGI:
Auran1_60633
UniProt:
F0XVT2
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MDAPPPGAAPPPTAAPDGAFRARVEAYYREHNPARLSLVDEIVAKYAGREEALWAKLAKK
YDGAATAADRVDFRSRTFDALAALRTPGVAPPAPSARPLDNVHKFRPFLPASSGERDDRV
KQSAHHAPRPEPDAAASSRGAELLEAVTDPLRDGPHGVLWRALRDRAAVKVVLRRVNCIR
GSCVGLLKAFDRHMNLVLVDAAETTVPPMRNPDRARPVTRFLKQVLIRGDNVVLVCRAPN
LVGHDRHQQRSKRGPGRSEKTVTVRKYLRKLSDGDDVEKEKEAALERLWAGLIDEHGEHL
GLGVVGGDGAMDEDAAPEEAGVPAAARGPVVSSDRIDEGVGSSDSSDEGCAGCAKCVTKD
ALLREADMEIQSLRAKLSTPGAAWAKTVEALPNRTQGMAKKGLALMARLEPTSTPRANGG
PDGSGSDDDSSDDPEPPRPRRRVTAARVDEPSAGPATEAKARDVNPVLAALFVHGGGDQS
RTAAILQAVVARAGKLLRLDLKEIKALRAMGRAIKGYFSLAALPNGGTRRKYAQQKVDAV
MEAVTPADGAAKNLLRGISRVCCGDNVSHSVIGRFSNAADRRKLQDDAGKLARHRMRALR
SDLVDLACAREYWHQNDDVRLDTFAGRCTKKVKIVTVQVDSDGRRTLVVKEDHHQRHTKH
AGDLEIYQAFLKSAGYASHLAAHPSHKISFTLFKRAKCPCIGEPHQRECADEIKTSMRER
LLALNRLRLSDTDVEVKLREYRLQPRTVKGEDDEGNSISSTMAVKELTEVMHRIHDSST
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgccgccgccgggcgccgcgccgccgcccacggcggcgccggacggcgccttc
cgcgcgcgcgtcgaggcctactaccgggagcacaacccggcgcggctgtcgctcgtcgac
gagatcgtggccaagtacgcgggccgcgaggaggcgctctgggccaagctcgcgaagaag
tacgacggcgccgcgacggcggccgaccgcgtcgacttccggtcgcggaccttcgacgcg
ctcgcggcgctgcggacgcccggcgtcgcgccgcccgcgccgtcggcgcggccgctggac
aacgtgcacaagttccggcccttcctgcccgcgagcagcggcgagcgcgacgaccgcgtg
aagcagagcgcgcaccacgcgccgcggcccgagcccgacgcggccgcgtcgtcgcgcggc
gccgagctgctcgaggccgtgacggacccgctccgcgacggcccccacggcgtgctctgg
cgcgcgctccgcgaccgcgcggccgtcaaggtcgtcctccgccgcgtcaactgcatccgc
ggcagctgcgtcggcctcctcaaggccttcgaccgccacatgaacctcgtcctcgtcgac
gccgcggagacgacggtgccgcccatgcggaacccggaccgcgcgcggcccgtgacgcgc
ttcctcaagcaggtcctcatccgcggcgacaacgtcgtcctcgtctgccgcgcgccgaac
ctcgtcggccacgaccggcaccagcaacggagcaagcgcgggccgggccgatccgagaag
acggtgaccgtccggaaatacctccggaagctgtccgacggcgacgacgtggagaaggag
aaggaggcggcgctggagcggctctgggcggggctcatcgatgagcacggagaacacctg
ggcctcggggtcgtcggcggcgacggcgcgatggacgaggacgcggcgcccgaggaggcg
ggggtcccagcagcagcccgcgggcccgtcgtttcgagcgaccgcatcgacgagggcgtc
ggctccagcgactccagcgacgagggctgcgcgggctgcgccaagtgcgtgacgaaggac
gcgctgctccgcgaggccgacatggagattcagagcctccgcgcgaagttgtcgacgcct
ggggccgcgtgggccaagaccgtcgaggcgctcccgaaccgcacgcagggcatggcgaag
aagggtttggcgctcatggcgcgcctcgagccgacgagcacgccgcgcgcgaacggcgga
cccgacggtagcggatccgacgacgactccagcgacgatccggagcccccccggccgcgg
cgccgggtcacagccgctcgtgtcgacgagccatcggcggggccggcgacagaggcgaag
gcccgtgacgtgaatcctgtgctcgcggccctcttcgtgcacggcggaggcgaccagagc
cggaccgcggcgatcctccaggccgtcgtcgcgcgagcagggaagctgctgcgactggac
ttgaaggagatcaaggccctacgcgccatgggccgggcgatcaagggctacttctcgctc
gcggcccttccgaacggcgggacgcgtcggaagtatgcccagcagaaggtggacgcggtg
atggaggctgtaacgccggcggatggcgctgccaagaacttgctccggggcatctcgcgg
gtctgctgcggcgacaacgtgagccacagcgtcatcggtcgcttctcgaacgcggcggat
cgacggaagctacaagacgacgcgggcaagcttgcacgccaccgcatgcgggctctgcgc
tctgatctcgtcgacctcgcctgtgctcgtgagtattggcaccagaacgacgacgtgcga
ctcgacactttcgcggggaggtgcaccaagaaggtgaagatcgtcacggtccaggtcgac
tccgacgggcggaggacgctcgtcgtgaaggaggatcaccaccagcgccacacgaagcac
gcgggcgatttggagatctaccaggccttcctgaagtcggcgggctacgcctctcacctc
gccgcccatcccagccacaagatctccttcacgctcttcaagcgggccaagtgcccgtgc
atcggcgagccgcaccagcgcgagtgcgccgacgagatcaagaccagcatgagggaacga
ctgctcgctctgaaccgcctgcgcctctcggacactgacgtcgaggtgaagctccgcgag
taccggctccagccccggacggtgaaaggcgaagacgacgagggcaacagtatcagctcc
accatggccgtcaaggagctcacggaggtcatgcatcggatccacgactcgtcgacgtga
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