Aureococcus anophagefferens: AURANDRAFT_6072
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Entry
AURANDRAFT_6072 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
aaf
Aureococcus anophagefferens
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_6072
03036 Chromosome and associated proteins [BR:
aaf03036
]
AURANDRAFT_6072
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
AURANDRAFT_6072
Chromosome and associated proteins [BR:
aaf03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
AURANDRAFT_6072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
HHD_RTEL1
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
20223127
NCBI-ProteinID:
XP_009034154
JGI:
Auran1_6072
UniProt:
F0Y2T2
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
YRYLVVVDFECTCVADTTYQKKTPFSHEIIEFPAVVVDLTLGESQDVFARPTFQRFVRPT
ERPRLSDFCTKLTGISQETVDAAEPLADVLAAFRAWLEEQNLAPGTYAMAADGPWDLRKF
LLGECARKHLAADPRWRTWVDVSLHLRKHYDVKRPGNLENKLALLGLAFEGRPHSGLDDA
RNIARLALRLRRDG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
taccgctacctcgtcgtcgtcgacttcgagtgcacgtgcgtcgccgacacgacgtaccag
aagaagacgcccttttcgcacgagatcatcgagttccccgccgtcgtcgtggacctgacg
ctcggcgaatcccaggacgtcttcgcccggccgacgttccagcgcttcgtgcgaccgacg
gaacggccgcggctcagcgacttttgcacgaaactcacgggcatttctcaggaaaccgtc
gacgccgcggagccgctcgcggacgtgctggcggccttccgcgcgtggctcgaagaacaa
aacctcgcgcccggcacctacgccatggccgccgacgggccctgggacctgcggaagttc
ctgctgggcgagtgcgcgcggaagcatctcgcggcggatccgcgctggcggacctgggtc
gacgtgtcgctgcacctgcgcaagcactacgacgtcaagcggccgggcaacctggagaac
aagctcgcgctcctgggcctggccttcgagggccggccgcacagcggcctcgacgacgcg
cggaacatcgcgcgcctcgcgctccgcctgcgccgcgacggc
DBGET
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