Aureococcus anophagefferens: AURANDRAFT_62396
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Entry
AURANDRAFT_62396 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aaf
Aureococcus anophagefferens
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaf03016
]
AURANDRAFT_62396
Enzymes [BR:
aaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AURANDRAFT_62396
Transfer RNA biogenesis [BR:
aaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AURANDRAFT_62396
Prokaryotic type
AURANDRAFT_62396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
20223872
NCBI-ProteinID:
XP_009034439
JGI:
Auran1_62396
UniProt:
F0Y1Q5
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MGVLEEEHAGFQSTLADLRRLFTKRRAAAEGLDAAVRGREASDAEAVREGARVIELEARV
EALEAAVQPGRARTVQGELNAALRTRFGGADIPTLGASRTDAGVHARGQCAHADLPVAPL
GGAPLELLEHQINRLLPDDARVHDLRPAPAPKPWQAREGLPWHAIANAAGKRYAYRLTAR
RGSADPLGRLYRGHVAYRAVDFGRLDDALACFVGEHDFAAFANNAPGVDPSGAARSTTRS
IRSATLLDEGGGDATLTFELDGALYKMVRNVVGAAVAVADGALPRDAIPALLAPGARRAD
NPAKAAPACGLCLEEVYYDDY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgctcgaggaggagcacgcgggcttccagtcgacgctcgcggacctgcgccgg
ctcttcacgaagcgccgcgccgccgccgagggcctggacgccgccgtgcgcggccgcgag
gcgagcgacgccgaggccgtccgcgagggcgcgcgcgtcatcgagctcgaggcgcgcgtc
gaggcgctggaggccgccgtgcagcccggccgcgcgcgcacggtccagggcgagctcaac
gcggcgctgcgcacgcgcttcggcggcgcggatattccgacgctcggcgcgtcgcgcacg
gacgcgggcgtccacgcgcgcggccagtgcgcccacgcggacctgccggtcgcgccgctc
ggcggcgcgccgctcgagctgttggagcaccagatcaaccggctgctgcccgacgacgcg
cgcgtgcacgacctgcgcccggcgccggcgcccaagccctggcaggcgcgggagggcctg
ccctggcacgccatcgccaacgccgcgggcaagcgctacgcgtaccggctgacggcgcgg
agaggcagcgcggacccgctgggccgcctgtaccggggccacgtcgcctaccgcgccgtc
gacttcggccgcctcgacgacgcgctcgcgtgcttcgtgggcgagcacgacttcgcggcc
ttcgcgaacaacgcgccgggcgtcgacccgtcgggcgccgcgcggtcgacgacgcgctcc
atccggtcggcgacgcttttggacgagggcggcggcgacgcgacgctgaccttcgagctc
gacggcgcgctctacaagatggtgcgcaacgtcgtcggcgccgccgtcgccgtcgccgac
ggcgcgctgccccgggacgcgatcccggcgctcctcgcgcccggcgcgcgccgcgcggac
aacccggccaaggccgcgcccgcctgcggcctctgcctcgaggaggtgtactacgacgac
tactag
DBGET
integrated database retrieval system
