KEGG   Aureococcus anophagefferens: AURANDRAFT_63680
Entry
AURANDRAFT_63680  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AURANDRAFT_63680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aaf03021]
    AURANDRAFT_63680
   03036 Chromosome and associated proteins [BR:aaf03036]
    AURANDRAFT_63680
Transcription machinery [BR:aaf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     AURANDRAFT_63680
   Coactivators
    SAGA/TFTC/STAGA complex
     AURANDRAFT_63680
Chromosome and associated proteins [BR:aaf03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     AURANDRAFT_63680
    STAGA complex
     AURANDRAFT_63680
    TFTC complex
     AURANDRAFT_63680
    SAGA complex
     AURANDRAFT_63680
    SLIK complex
     AURANDRAFT_63680
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_CAF1B_HIR1 TFIID_NTD2 EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 20224446
NCBI-ProteinID: XP_009036249
JGI: Auran1_63680
UniProt: F0Y6S0
LinkDB
Position
Unknown
AA seq 571 aa
MLATTLEVGDEKTAALHVASYETFHRWVEGGALESVRCELSATLFPVFAQCFLVVVATEA
EASGEDGGEPASRAFLERWGASHADRFAAEVEALRLVTSPVVAAKDAYCARLRGGRWVVP
LSGAAQALLGDFLTSTGNAAVLKVFNEKVTLDGTAPGRGEAAALVETSGDEVEAAAAARA
GAAPPPARLGVLLGSEALDGGAPAGRAPAPDWDDDYGRGLLRDGSRRPLAPPPPAGLVGR
GRAPLDALKPTVLDARVAGADAARLSCCAASRDATRLAGGFADASLRLWRVDELAGDDAG
SSDAEAATTALVAHDRPVYALAWSSESRYLLSGGGDGCCVLWDADAPGRGGPGASGAPLC
SYAAHVAPCWSVAWCAASGGHVFATGGGDRTARLFATDRADPLRVFAGHWADVSAVCFHA
NAHYVLSASHDKTCRLWDVRAAGGPGRRCARVLDGAAGALAACDACPSGRKAAAAGLDGG
LHLWDLDSGRKLSSTKAHRGPAYVAKFSADGAAVATSGRDRSLKVWDAAALAAAAGDDVA
PAHAVETTDSPVFDVAWTPGNLCLASGPLLA
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgctcgccaccacgctcgaggtcggcgacgagaagacggcggcgctgcacgtcgcgtcc
tacgagacgttccaccgctgggtcgagggcggcgcgctcgagagcgtgcgctgcgagctg
agcgcgacgctcttccccgtcttcgcgcagtgcttcctcgtcgtcgtcgcgacggaggcc
gaggcgtcgggcgaggacggcggcgagcccgcgtcgcgcgcgtttctcgagcggtggggc
gcgtcgcacgcggaccgcttcgccgccgaggtcgaggcgctgcggctcgtgacgagcccc
gtcgtcgcggcgaaggacgcctactgcgcgcggctccgcggcggccgctgggtcgtgccg
ctgagcggcgccgcgcaggcgctgctgggcgacttcctcacgtcgacgggcaacgccgcg
gtgctcaaggtcttcaacgagaaggtaactttagacggcacggcgccgggccgcggcgag
gccgcggcgctcgtggagacgagcggcgacgaggtcgaggccgcggcggccgcgcgcgcg
ggcgcggcgccgccgcccgcgcggctcggcgtgctcctcggcagcgaggcgctcgacggc
ggcgcgcccgcgggccgcgcgccggcgccggactgggacgacgactacgggcggggcctc
ctgcgcgacgggtcgcggcgccccctcgcgccgccgccgcccgcgggcctcgtgggcaga
ggccgcgcgccgctcgacgcgctcaagccgacggtgctcgacgcgcgcgtcgcgggcgcg
gacgcggcgcgcctgagctgctgcgcggcgtcgcgcgacgcgacgcggctggccggcggc
ttcgccgacgcgtccctgcggctctggcgcgtcgacgagctcgcgggcgacgacgcgggc
tcctcggacgcggaggccgcgacgaccgcgctcgtcgcgcacgaccggcccgtctacgcg
ctggcctggagctccgagagccgctacctgctctccggcggcggcgacgggtgctgcgtg
ctctgggacgccgacgcgcccggccgcggcgggccgggcgcgtcgggcgcgccgctctgc
tcctacgcggcgcacgtcgcgccgtgctggtccgtggcctggtgcgcggcgtccgggggc
cacgtcttcgccacgggcggcggcgaccgcacggcgcgcctcttcgccacggaccgcgcg
gacccgctccgggtcttcgcgggccactgggccgacgtgagcgccgtctgcttccacgcg
aacgcgcactacgtcctctccgcgtcccacgacaagacgtgccggctctgggacgtgcgc
gcggccggcgggccgggccgccgctgcgcgcgcgtgctcgacggggccgcgggcgcgctc
gcggcctgcgacgcgtgcccgtcggggcggaaagcggccgccgcggggctcgacggcggc
ctccacctctgggacctcgacagcggccgcaagctcagctcgacgaaggcgcaccggggg
ccggcctacgtcgccaagttctccgcggacggcgccgccgtcgcgacgagcggccgcgac
cggagcctgaaagtgtgggacgcggccgcgctcgcggcggccgcgggcgacgacgtcgcg
ccggcccacgccgtcgagaccacggactcgcccgtcttcgacgtcgcctggacgccgggc
aacctctgcctcgcgtccgggcccctcctcgcctga

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