Aureococcus anophagefferens: AURANDRAFT_70117
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Entry
AURANDRAFT_70117 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K12877
protein mago nashi
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03013
Nucleocytoplasmic transport
aaf03015
mRNA surveillance pathway
aaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURANDRAFT_70117
09122 Translation
03013 Nucleocytoplasmic transport
AURANDRAFT_70117
03015 mRNA surveillance pathway
AURANDRAFT_70117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_70117
03041 Spliceosome [BR:
aaf03041
]
AURANDRAFT_70117
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AURANDRAFT_70117
Spliceosome [BR:
aaf03041
]
Complex C
Other components
EJC/TREX
AURANDRAFT_70117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
20227729
NCBI-ProteinID:
XP_009035164
JGI:
Auran1_70117
UniProt:
F0Y2U5
LinkDB
All DBs
Position
Unknown
AA seq
148 aa
AA seq
DB search
MASSEFYLRYYVGHKGKFGHEFMEFEFAPNGKLRYANNSNYKNDTMIRKEVTVSAAALRE
VERIVADSEVTKEDDNQWPEPDRVGRQELEIISGGEHISFTCSKIGSLLDVQESKDPEGL
RCFYYLVQDLKCFVFSLIALHFKIKPIP
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcggagttctacctgcgctactacgtcggccacaagggcaagttcggccac
gagttcatggagttcgagttcgcgccgaacggcaaactccgctacgcgaacaactccaac
tacaaaaacgacacgatgatccgcaaggaggtgacggtctccgccgcggccctgcgcgag
gtcgagcgcatcgtcgccgactccgaggtcaccaaggaggacgacaaccagtggcccgag
cccgaccgcgtcggccgccaggagctcgagatcatctccggcggcgagcacatctccttc
acctgcagcaagatcggctcgctcctcgacgtccaggagtccaaggaccccgagggcctc
cgttgcttctactacctcgtccaggacctcaagtgcttcgtcttctccctcatcgcgctc
cacttcaagatcaagccgatcccgtga
DBGET
integrated database retrieval system