Aureococcus anophagefferens: AURANDRAFT_70371
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Entry
AURANDRAFT_70371 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03013
Nucleocytoplasmic transport
aaf03015
mRNA surveillance pathway
aaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURANDRAFT_70371
09122 Translation
03013 Nucleocytoplasmic transport
AURANDRAFT_70371
03015 mRNA surveillance pathway
AURANDRAFT_70371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_70371
03041 Spliceosome [BR:
aaf03041
]
AURANDRAFT_70371
03009 Ribosome biogenesis [BR:
aaf03009
]
AURANDRAFT_70371
03012 Translation factors [BR:
aaf03012
]
AURANDRAFT_70371
Enzymes [BR:
aaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURANDRAFT_70371
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AURANDRAFT_70371
mRNA cycle factors
Stress granule specific factors
AURANDRAFT_70371
Spliceosome [BR:
aaf03041
]
Complex C
Other components
EJC/TREX
AURANDRAFT_70371
Ribosome biogenesis [BR:
aaf03009
]
Eukaryotic type
90S particles
Helicases
AURANDRAFT_70371
Translation factors [BR:
aaf03012
]
Eukaryotic type
Initiation factors
eIF-4
AURANDRAFT_70371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
AAA_30
CMS1
TniB
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
20227762
NCBI-ProteinID:
XP_009040647
JGI:
Auran1_70371
UniProt:
F0YJI5
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MANERNYVSSEMDITQSTDVKVIDSFEGMALREDLLRGIYAYGFERPSAIQQRAITPIVA
GRDVIAQSQSGTGKTAVFCIAMLQVLESATNETQMLTISPTRELAEQTQKVCLALGDYMN
VQCHACIGGKSIGEDIRRLDYGVQIVSGTPGRVFDMIKRRNLRTRNLKMLVIDEADEMLN
RGFKEQIYDIYRYLPPSTQVVLISATMPQEVLDMTRKFMNEPVRVLVKRDELTLEGIKQF
FVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVSAMHGDMPQRERDAIMAEFRGGAS
RVLIATDIWGRGLDVQQVSLVICYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDVRI
LRDIEQYYSTQIDEMPMNVADLI
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgagagaaactacgttagctccgaaatggacattacacagtcaacagacgtg
aaagtaatcgatagtttcgagggaatggctttgcgagaggatctgctgcggggcatctac
gcctatggttttgaacgcccttccgctatccaacaacgagcaatcacgccaatcgtggct
ggacgcgatgttatcgctcagtcacaatcgggtacagggaaaaccgcggtattctgtatc
gcgatgctccaggtgcttgaatctgcaaccaacgaaacacaaatgctgacgatatccccg
acacgtgagcttgctgagcagacgcagaaggtatgtttggctctcggtgactacatgaac
gtgcagtgtcatgcttgtatcggaggcaagtcaataggcgaggatattcgtcgtttggac
tacggtgtgcaaattgttagcgggacgcctgggcgtgtcttcgatatgattaagcgacgt
aacctgcggaccaggaatttgaagatgttggtcatcgatgaagccgacgaaatgctgaat
cggggtttcaaagaacagatatatgatatctaccgctaccttccaccgtccacacaggtt
gttctcatatctgccactatgccgcaggaggtattagacatgactcgtaaattcatgaac
gagcccgtacgtgttctcgttaagcgtgatgaactcaccttggagggaatcaagcagttc
tttgtggcggttgagcgcgaggaatggaagtttgacacgctctgtgatttgtacgacaca
ctcaccatcacgcaggctgtcattttctgcaacacaaagcgcaaagtttctgcaatgcat
ggtgacatgcctcagcgggagcgtgatgccatcatggccgagttccgggggggcgcgtct
cgcgttttgattgcgaccgacatttggggccgcgggcttgacgttcaacaagtgtctctc
gtcatctgctatgacctacccaacaatcgcgagctatacatacatcgcattgggcgctct
ggaagatttggccgcaagggtgttgcaattaacttcgtaaaaaatgatgacgttcggatc
ctccgggatattgagcagtactattcgactcagattgatgaaatgcccatgaatgtcgca
gatctcatctaa
DBGET
integrated database retrieval system
