Aureococcus anophagefferens: AURANDRAFT_70381
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Entry
AURANDRAFT_70381 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURANDRAFT_70381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aaf03041
]
AURANDRAFT_70381
03009 Ribosome biogenesis [BR:
aaf03009
]
AURANDRAFT_70381
Enzymes [BR:
aaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURANDRAFT_70381
Spliceosome [BR:
aaf03041
]
Complex A
U1 snRNP components
U1 related factors
AURANDRAFT_70381
Complex B
AURANDRAFT_70381
Ribosome biogenesis [BR:
aaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
AURANDRAFT_70381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
20227764
NCBI-ProteinID:
XP_009040608
JGI:
Auran1_70381
UniProt:
F0YJQ5
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MYGGGGGYGGGGGYGGGYGGGRGGGGGGFGSGARPRSDAASAARVDRARALSFARAPPPG
GYGGGGYGGGGYGGGFGGGGFGGGRGGGGGGLGSGLRDIQWDLSQLPVFEKNFYIEHPDV
TARSEGDADAWRTSKQIKIEGRGVPKPVSTFEEASMPDYVLTEVMKQGFKEPSPIQAQGW
PMALLGRDMIGISRTGSGKTLAFLLPGMIHINAQPYLQPGDGPIVLVLAPTRELAVQIKV
ECDKFGASSQIKNTCVYGGAPKRTQTGDLQRGVEIVIATPGRLIDFLESGVTNLRRVTYL
VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVRNMANDFLKDFYQVTVGSL
ELSANKDITQYVECVDDGAKYRRMTDFLKEHGVDKMIVFVETKRGCDQLSRSLAHEGFPA
RCIHGDKAQDERDWVLNEFRSGKCPLLVATDRAPRARARLTARLRRRMVVNFDFPSNLED
YVHRIGRCGRAGQKGTALSFFTQKSSKWASGLCKILGDAGQKIPPELQQMQSYGGGGGGR
YGRR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcggcggcggcggctacggcggcggcggcggctacggtggcggctacggcggc
gggcgtggcggcggcggcggcggattcggctccggcgcgcgtccgcgcagcgacgccgcc
tcggccgcgcgcgtggaccgcgctcgcgcgctgagcttcgcgcgcgcccctcctccaggc
gggtacggcggtggcggctatggcggcggcggctacggcggcggcttcggcggtggcggc
ttcggcggcgggcgtggcggcggcggcggcggcctcggctccggcctgcgcgacatccag
tgggacctgagccagctgcccgtcttcgagaagaacttctacatcgagcacccggacgtg
accgcgcggtccgagggcgacgcggacgcgtggcggacgtcgaagcagatcaagatcgag
ggccgcggcgtgcccaagcccgtgtcgacgttcgaggaggcgtccatgcccgactacgtg
ctcacggaggtcatgaagcagggcttcaaggagccctcgccgatccaggcccagggctgg
cccatggcgctcctcggccgcgacatgatcggcatctcgcggacgggctcgggcaagacg
ctcgcgttcctgctgccgggcatgatccacatcaacgcgcagccctacctccagcccggc
gacgggccgatcgtcctcgtcctcgcgccgacgcgcgagctcgcggtgcagatcaaggtc
gagtgcgacaagtttggcgcgtcgtcgcagatcaagaacacgtgcgtctacggcggcgcg
ccgaagcggacgcagacgggcgacctgcagcgcggcgtcgagatcgtcatcgcgacgccg
ggccgcctcatcgacttcctcgagtccggcgtgacgaacctccgccgcgtgacgtacctc
gtgctcgacgaggcggaccgcatgctcgacatgggcttcgagccccagctccgcaagatc
gtgagccagatccggccggaccgccagacgctcatgtggtccgcgacctggcccaaggag
gtccgcaacatggccaacgacttcctcaaggacttctaccaggtcaccgtcggctcgctc
gagctctccgcgaacaaggacatcacgcagtacgtcgagtgcgtcgacgacggcgccaag
taccggcgcatgaccgacttcctcaaggagcacggcgtcgacaagatgatcgtcttcgtc
gagacgaagcgcggctgcgaccagctctcccggtccctcgcgcacgagggcttccccgcg
cggtgcatccacggcgacaaggcccaggacgagcgcgactgggtgctcaacgagttccgc
tccggcaagtgcccgctcctcgtcgcgacggacagagcgccgcgcgcgcgcgcgcggctc
accgcccgtcttcggcgcaggatggtcgtcaacttcgacttcccctcgaacctcgaggac
tacgtccaccgcatcggccgctgcggccgcgccggccagaagggcacggccctctccttc
ttcacgcagaagtcctccaagtgggcctcgggcctctgcaagatcctcggcgacgcgggc
cagaagatccccccggagctccagcagatgcagtcctacggtggcggcggcggcggacgc
tacggccgacgctga
DBGET
integrated database retrieval system
