Aureococcus anophagefferens: AURANDRAFT_71962
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Entry
AURANDRAFT_71962 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03030
DNA replication
aaf03420
Nucleotide excision repair
aaf03430
Mismatch repair
aaf03440
Homologous recombination
aaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AURANDRAFT_71962
03420 Nucleotide excision repair
AURANDRAFT_71962
03430 Mismatch repair
AURANDRAFT_71962
03440 Homologous recombination
AURANDRAFT_71962
03460 Fanconi anemia pathway
AURANDRAFT_71962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaf03000
]
AURANDRAFT_71962
03032 DNA replication proteins [BR:
aaf03032
]
AURANDRAFT_71962
03400 DNA repair and recombination proteins [BR:
aaf03400
]
AURANDRAFT_71962
Transcription factors [BR:
aaf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
AURANDRAFT_71962
DNA replication proteins [BR:
aaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
AURANDRAFT_71962
DNA repair and recombination proteins [BR:
aaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
AURANDRAFT_71962
MMR (mismatch excision repair)
AURANDRAFT_71962
DSBR (double strand breaks repair)
HR (homologous recombination)
AURANDRAFT_71962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
DUF2838
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Ureidogly_lyase
HROB
Motif
Other DBs
NCBI-GeneID:
20228482
NCBI-ProteinID:
XP_009038808
JGI:
Auran1_71962
UniProt:
F0YE47
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MVRSAGPGCAVALVALLSAVADESDPYADLYASLLAGQLPGVLTAAGPGVFDDGRRLAYS
YAPKLNATTKRGRLNYTYFSPAPFAYRDTANPWAAFFAFDGDYWDGDELRYPNAVTDIDG
SYDPGSRTLVLWASPAQAKADWLAALRSVLYRAKASLSVKDRPNVHTRVVWISLLDVEGN
RGTSFNVTIALKTATTIITDRSGVRLDADVEDGDEHDDDGAVLEPVPRADDDDDGAVLEP
VPRADDDDDGAVLEPEPRADDDDGGAVVEPEPRAYDDEGWSDGQRPSRGDLILEACVDAA
VDYFARRRDTYPAIVRQGSRLNAAAARELYGAEDGAAAADGDGRRLNARELREAMRAAAG
RVRRRGALRAFRESGNAALRRAVTGDPGTRVRDHVRRVAGDKRRAMAGRVKTLRRRAREP
VVVRAVDKALFTLGVGWVVATEYVVLARPEHFGAWYVASLAPLLAHRVVTYRRRRWAYFC
LDFCYALNALCMGLAVAALAGGRARGRLFALAFALANGPLLSAILVWRNSFIFHSLDHVT
STALHALPPMWTYAVRWGGGGDAGRALGFPAAADAVAAYAAWQALYVLKTEVVDAAYLRS
TPDESTSLRWIARDGKNAMNRLCKGVLVSGGLMRRDEDFDPCTRKTKLTFWAAQLLYTVV
TLAPAPLMWRSRRAHEAFLIAMFTTAVYNGASYYIEVFSRRYNLKFDVADDDAGDDDGDD
GDDEDHGKIDAGAIEAIISGQASSDTGYSPVIQVINATEIKNNQTGAGSGRFRIVISDGA
RFTTSMAASQLATMLKGGELQAGCFARLNKFVLNTIQNKSIVILLDVAVVGAPTGLVGAP
TSYPDGAPLPSATAAALGGPAAPAPARAFAPQHNARPAPAAAPKPPSNFGAAMRGAAAPG
GGGAFRSISELNPYQQRFTIKARVTAKGPMRTWNKPTSSGNLFSVDLLDGSGEIRGTFFK
EVADKVFPLLEEGKVYVFQETSGRLKPSNKQYTSIPHEFEVTFGNVTVEPADDDGAIARI
VGDWKKISMFADGGGPREGNVDIVGVIKAAFPAGQITSKRTGQELTKREVVLCDDSGYDV
RLTFWGELALRDDAFFEAQPVLAAKGLRVSDFGGVSLSSGFGSQLIFDGQEDPESLRLRA
WWTEGGGREAPTVALTGASGGSGAPAAFGDRIVLDDIKGRQLGFGEKPDYVTFKGTLNFV
KTDRLWYEACAQEGCQKKVVQNSDGTWHCEKCQATNAECKRRYLMSSTFVDDSAQSWVSA
FNDHATKIFLGVNADDLAAYKEEVENEDGKFEDYMKQFLFKQYVVKVRVKSEVWQEQSRV
KASIVDIFDLDYVAESRDILAALAAAVAEQPAFVFTEDNFRAPKLPANLKVVDVPLVEAT
DAALEGFGYVLHSADERTVEKKNFEIVQWPAKGWRKCDPGCGDEAGTTEGRFEVRWEGDF
FYGNNLAVATTNNTYLDGLGALPEVASADEATCAGDGKAILLWMSDYHGDGAQLFFPERR
HPFVVCLGPAACGDDVAPADMRAFYVPAGKGVYFHPGTWHNGVYVAKDVIARLGGDKATF
LTRQGRVHSRFSASWAEEFGCVLRVPLTL
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgttcagcggggccgggctgcgccgtcgcgctcgtcgcgctgctgtcggcggtc
gccgacgagtcggacccctacgcggatctctacgcgtccctgctcgcgggccagctgccc
ggcgtgctcacggccgcgggccccggcgtcttcgacgacgggcggcgcctggcctactcc
tacgcgccgaagctcaacgcgacgacgaagcgcgggcggctcaactacacctacttctcg
ccggcgcccttcgcctaccgggacacggcgaacccctgggcggccttcttcgccttcgac
ggcgactactgggacggcgacgagctgcgctaccccaacgccgtcacagacatcgacggg
tcctacgaccccgggagccgcacgctcgtgctctgggcgtcgccggcccaggccaaggcc
gactggctcgccgcactccggagcgtgctctaccgggccaaggcgtcgctcagcgtcaag
gaccggcccaacgtccacacgcgcgtcgtctggatctcgctcctcgacgtcgagggcaac
cgcgggacctcgttcaacgtcacgatcgcgctgaagacggcgacgacgatcatcacggac
cgctccggcgtccgcctcgacgcggacgtggaagacggcgacgagcacgacgacgacggc
gccgtcctcgagccggtgccgcgcgccgacgacgacgacgacggcgccgtcctcgagccg
gtgccgcgcgcggacgacgacgacgacggcgccgttctcgagccggagccgcgcgccgac
gacgacgacggcggcgccgtcgtcgagccggagccgcgcgcgtacgacgacgagggctgg
tccgacggccagcggccgagccgcggcgacctcatcctcgaggcctgcgtcgacgccgcc
gtcgactacttcgcgcggcggcgcgacacgtacccggccatcgtgcgccaggggagccgg
ctcaacgccgccgccgcgcgcgagctctacggcgccgaggacggcgccgcggcggcggac
ggcgacggtcggcggctcaacgcgcgcgagctgcgcgaggccatgcgcgccgcggcgggc
cgcgtgcggcggcgcggcgcgctccgcgcgttccgcgagtccggcaacgcggcgctccgc
cgggccgtcacgggcgacccggggacgcgcgtccgcgaccacgtgcgccgcgtcgccggc
gacaagcggcgggccatggcgggccgcgtgaagacgctccggcgccgcgcgcgcgagccc
gtcgtcgttcgggccgtcgacaaggcgctcttcacgctgggcgtgggctgggtcgtcgcg
acggagtacgtcgtcctcgcgcggcccgagcactttggggcctggtacgtcgcgagcctc
gcgccgctgctcgcgcaccgcgtcgtcacgtaccggcgccggcgctgggcctacttctgc
ctcgacttctgctacgcgctcaacgcgctctgcatgggcctcgccgtcgcggcgctcgcg
ggcgggcgcgcgcgcggccgcttgttcgcgctcgccttcgcgctcgcgaacgggcccctg
ctctccgcgatcctcgtctggcgcaactcgttcatcttccactcgctggaccacgtgacg
tcgacggcgctccacgcgctgccgccgatgtggacctacgccgtgcgctggggcggcggc
ggcgacgccgggcgcgcgctcgggttcccggcggcggcggacgccgtcgccgcgtacgcc
gcctggcaggcgctctacgtcctgaagacggaggtggtcgacgccgcgtacctccgatcg
acgcccgacgagtcgacgagcctgcgctggatcgcgcgcgacgggaagaacgccatgaac
cggctctgcaagggggtcctcgtgtccgggggcctcatgcggcgcgacgaggacttcgac
ccttgcacgcggaagacgaagctcacgttctgggccgcgcagctgttgtacaccgtcgtc
acgctcgcgcccgcgccgctcatgtggcggtcgcgccgcgcgcacgaggcgttcctgatc
gccatgttcacgacggccgtctacaacggcgcgtcctactacatcgaggtgttctcgcgg
cgctacaacctcaagttcgacgtcgcggacgacgacgcgggcgacgacgacggcgacgac
ggcgacgacgaggaccacggtaagatcgacgccggcgccatcgaggccatcatttcgggc
caggcgtcgtcggacaccgggtactcgcccgtgatccaggtcatcaacgcgacggagatc
aagaacaatcagacgggcgccggctccggccggttccgcatcgtcatctccgacggcgcg
cggttcacgacgtcgatggcggcgtcgcagctcgccacgatgctgaagggcggcgagctc
caggccggctgcttcgcgcgcctgaacaagttcgtcctgaacacgatccagaacaagtcg
atcgtcatcctcctcgacgtcgcggtcgtcggcgcgccgaccggcctcgtcggcgcgccg
acgagctaccccgacggcgcgccgctcccgagcgcgacggcggcggccctcggcggcccc
gcggccccggcccccgcgcgggccttcgcgccccagcacaacgcgcggcccgcgcccgcg
gccgcgccgaagccgccgtcgaacttcggcgccgcgatgcgcggcgcggccgcgccgggc
ggcggcggcgcgttccggtccatcagcgagctcaacccctaccagcagcgcttcacgatc
aaggcgcgggtcacggccaagggccccatgcgcacctggaacaagcccacgtcgtcgggc
aacctcttctccgtcgacctcctcgacggctccggcgagatccgcggcacgttcttcaag
gaggtcgcggacaaggtcttcccgctcctcgaggagggcaaggtctacgtcttccaggag
acgagcgggcgcctcaagccgtcgaacaagcagtacacgtccatcccccacgagttcgag
gtcacgttcggcaacgtcaccgtcgagcccgcggacgacgacggcgcgatcgcgcgcatc
gtcggcgactggaagaagatctccatgttcgccgacggcggcggcccgcgcgagggcaac
gtcgacatcgtcggcgtcatcaaggccgcgttccccgcgggccagatcacgtcgaagcgc
acgggccaggagctcacgaagcgcgaggtcgtgctctgcgacgacagcggctacgacgtg
cgcctcacgttctggggcgagctcgcgctgcgcgacgacgccttcttcgaggcgcagccc
gtgctcgcggccaaggggctccgcgtgtccgacttcggcggcgtgtcgctgtcgtcgggc
ttcgggtcgcagctcatcttcgacggccaggaggaccccgagtccctgcggctccgggcc
tggtggaccgagggcggcggccgcgaggcgccgacggtcgcgctgacgggcgcgtccggc
ggctcgggcgcgcccgcggcgttcggcgaccgcatcgtcctcgacgacatcaagggccgg
cagctcggcttcggcgagaagcccgactacgtgaccttcaagggcacgctcaacttcgtc
aagaccgacaggctctggtacgaggcctgcgcccaggagggctgccagaagaaggtcgtg
cagaactccgacggcacgtggcactgcgagaagtgccaggcgacgaacgccgagtgcaag
cggcgctacctcatgtcgtcgaccttcgtcgacgacagcgcccagtcctgggtctccgcc
ttcaacgaccacgcgacgaagatcttcctcggcgtcaacgccgacgacctcgccgcgtac
aaggaggaggtcgagaacgaggacggcaagttcgaggactacatgaagcagttcctcttc
aagcagtacgtcgtcaaggtccgcgtcaagtccgaggtctggcaggagcagtcccgcgtc
aaggcgtccatcgtcgacatcttcgacctcgactacgtcgccgagtcgcgggacatcctc
gccgcgctcgcggccgccgtggcggagcagcccgccttcgtgttcacggaggacaatttc
cgcgcgccgaagctccccgcgaacctcaaagtcgtcgacgtgcccctcgtggaggcgacg
gacgcggcgctggagggttttgggtacgtgctccacagcgccgacgagcgcacggtggag
aagaagaacttcgagatcgtccagtggcccgccaagggctggcgcaagtgcgacccgggc
tgcggcgacgaggcggggacgacggagggccggttcgaggtgcggtgggagggcgacttc
ttctacggaaacaacttggccgtcgcgacgacgaacaacacgtacctcgacggcctcggc
gcgctgccggaggtcgcgagcgccgacgaggcgacctgcgccggcgacgggaaggcgatc
ttgctctggatgagcgactaccacggcgacggcgcgcagctcttcttccccgagcggcgg
caccccttcgtcgtgtgcctgggccccgcggcctgcggcgacgacgtcgcgccggccgac
atgcgcgccttctacgtgcccgcgggcaagggcgtctacttccacccggggacctggcac
aacggcgtctacgtcgccaaggacgtcatcgcgcgcctcggcggcgacaaggcgacgttc
ctcacgcgccagggcagggtccacagccgcttctccgcgagctgggccgaggagttcggc
tgcgtcctgcgcgtcccgctgaccctctga
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integrated database retrieval system
