Aureococcus anophagefferens: AURANDRAFT_72374
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Entry
AURANDRAFT_72374 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURANDRAFT_72374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_72374
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURANDRAFT_72374
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AURANDRAFT_72374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4604
DUF2730
Motif
Other DBs
NCBI-GeneID:
20228680
NCBI-ProteinID:
XP_009040374
JGI:
Auran1_72374
UniProt:
F0YIP0
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MSANRKLQTEIDRTLKKVEEGVEIFDEIWDKVYSATQQNQKEKYEVDLKKEIKKLQRHRD
QIKTWVASSDIKDKRPLTDVHHSARKLIETKMEQFKVCEKETKTKTYSKEGLARETKIDP
HEAAKNSTRDWLSEKVDQLSLQIDMHEADMEKLTSGKGSKRNKQEIEQLEASIKRHRWHI
ARLEQITRLLDNDALQHEQINEIKEDVEYYIDANQEPDFMDAYDETMDIFESLDLGDLPT
DEDAAAAAAANTDEKKKKKKKGDDDDDDEKDDKKKKKKDKQAEKEAKEEAKKEKKANKAK
ATTAMPLTIGRATVAKAAPAPVPAAAAPIKGAKGASTTSKGMPTPGVPTPQQVAPPASGA
ESLANILKQQSAQQQQTGVAMADRLRAQQQQPTAPVPGAAFSAAAQRSQHQQQTSSLVMS
QQAPGRGAQGGAQGAGGSIGFGTTRSGQGNSSGYGYGTNDSRAGTRQQGIIPQQGQSPQQ
GHDGGLSMLARTRAPGASPPSNLPTIGPVSGQQSVAGTMFQNAPGSGALGTAPSRGLTPQ
TAAGGSVRSSTTHNCPVQSRGAQVALDQCFAPGASLEPLLDISEHMAADDTYVRLLDAQG
PSGNDDNAVSLSARKLAALALSMRRAPRKADSERPRQYVPRNPYATPPAFPSTPAPTFDD
AKRHEEPKVTTDEFEQGTYVYFDYETGWCQRIKSDFTFEYNFLEDELGPAPLYELSKTTV
TTALIVRSTVFQIGHAKITLVRIDASPQSQNLWRLRSVKTAAPTRRDQTWRVRQARREER
IRGWDNEIVNSDTGRQPSGAALPCGVNYRGYAVAVQEDSPSITVRDATITGLESRLTDTT
GAEERHATSASAGCTLLQFAVSIRLEATQAALPHLRSSCFYGLYLNVKLMYGT
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaataggaagcttcaaacagagatcgatcggactttgaagaaagtcgaggaa
ggagtcgagatcttcgatgagatatgggataaggtttattcggcgactcaacagaaccag
aaggagaagtatgaggttgacttgaaaaaggaaatcaagaaactccagcgacaccgagat
caaatcaagacatgggtggcgtcgtcagacatcaaagacaagcgtccgctgactgacgtg
catcacagtgcgcgaaagctcatcgagacgaagatggaacagtttaaggtttgcgagaag
gagacaaagaccaaaacttattctaaagagggcctcgctcgcgagactaagatcgacccg
catgaggcggccaaaaatagcacgcgcgattggctttcagaaaaggtagaccagctctca
ctgcagatcgacatgcacgaggcagatatggaaaagctcacatcgggtaaaggctcaaaa
cggaacaagcaagagattgaacagctcgaggcatccatcaagcgccaccggtggcacata
gctcggctagagcagattacacggcttctggataacgatgctctccagcacgagcaaata
aatgagatcaaagaggatgtggaatattatattgacgcgaatcaagagccagacttcatg
gacgcctatgacgagacaatggatatttttgagtcacttgatctgggcgacctccccaca
gatgaagatgcggcagccgcggccgcggccaatacagacgaaaagaagaagaagaagaag
aagggagatgacgacgacgacgacgaaaaggatgacaaaaaaaaaaaaaaaaaagacaag
caggctgaaaaggaggcgaaagaggaagccaaaaaagaaaagaaggctaacaaggccaag
gcaaccacggcaatgccactaacgattggtcgtgcgacagtagcgaaagcggcgcccgcg
cccgtccccgctgcggctgcgcctatcaaaggtgctaagggcgcgtctaccactagcaag
ggcatgccaacgcccggtgttccgacgcctcagcaagttgctccgccggcgtctggtgcc
gagtcgctcgcaaacatcctcaagcagcagagtgcgcagcaacagcaaactggtgtcgca
atggccgacaggcttcgggcccagcagcaacagccaacggccccagtgcctggagctgct
ttttctgcagcggcgcagcgatcacagcatcaacaacagacctccagcctcgtgatgagc
caacaggcaccaggacgtggggcgcagggcggtgcgcagggagctggcggttcaattggc
tttggtaccacgcgctcagggcaaggcaacagttcaggctacggctacggtacgaatgac
tctcgggcaggaacgcgacagcagggcatcattccgcagcagggtcagtcaccacaacaa
gggcacgacggcgggctgagcatgcttgcccggacgcgtgccccgggcgcatcgccgccg
tctaacctcccgacgattggccccgtctcgggtcaacagagcgtcgcagggaccatgttt
cagaacgcgcctgggtcgggcgcgttggggactgcgccatcacgtggtctcactccgcag
accgctgcaggcggtagtgtgcgcagtagcacaacgcataactgccctgtgcagagccga
ggcgcacaagtcgctctcgaccagtgcttcgcacctggtgccagtcttgagcccctcctt
gatatctctgaacatatggctgctgatgacacctacgtgcgtctccttgatgcgcaggga
cccagcggtaatgatgacaatgccgtaagtctgagtgctcgcaagctcgcggctctcgca
ctcagcatgcgccgcgctccacgcaaagctgactcggagcgtccgaggcaatatgtgccc
cgaaatccttatgcgacaccgccggcctttccttcaacgcccgcgccgacctttgacgac
gcgaagcgccatgaagagcctaaggtgacgactgacgagtttgaacagggcacttatgtg
tacttcgattacgagaccggatggtgccagcgcatcaaatccgacttcaccttcgagtat
aattttcttgaggatgaactcggacctgcacctctctacgaactgtctaaaaccaccgtt
actactgcactcatcgttcgctcaacagtcttccagataggacacgcaaaaataacgctg
gtgcgaattgatgcatcacctcagtctcagaatttgtggcggcttcgcagtgtcaaaaca
gcagcgcctacacgtcgcgatcagacgtggcgagttcgacaagccagacgtgaggagcgg
atcaggggttgggataacgagatagtaaactccgacacggggaggcagcctagtggggct
gccctgccgtgtggggtgaactatcgaggttatgcagtggcggtccaggaagactctccg
tctattacagtgcgagacgcaactataacagggttagaaagccgtctgacagacaccaca
ggagcagaagagcgccacgctacttctgcctctgctggctgtacactccttcagttcgct
gtctctataagacttgaagccactcaggctgcactcccccatctacgctcatcctgcttc
tacggattgtaccttaacgtcaagttgatgtacggaacttag
DBGET
integrated database retrieval system
