Aureococcus anophagefferens: AURANDRAFT_72385
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Entry
AURANDRAFT_72385 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
aaf
Aureococcus anophagefferens
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaf03021
]
AURANDRAFT_72385
Transcription machinery [BR:
aaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
AURANDRAFT_72385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_16
TPR_12
TPR_14
TPR_1
TPR_CcmH_CycH
ANAPC3
TPR_10
TPR_9
TPR_4
DIP0205-like_N
Motif
Other DBs
NCBI-GeneID:
20228686
NCBI-ProteinID:
XP_009040293
JGI:
Auran1_72385
UniProt:
F0YIR4
LinkDB
All DBs
Position
Unknown
AA seq
1937 aa
AA seq
DB search
MDGRVTVERLAIQNTQGHFTYFLPIMLQQLIIQTQPLDTINPLAFYTDHPFLVAQDIDLA
PLIVDICIHRLRQLQPRRRRRIEDLRLFLLQPNLVCFLSQHRKSAGMKEGKASMSCEIVA
ARSGDLCATLGEGDPLSDTATARRFTAVRNLRGGVLLAPPATTFPGNRSPVQASRGASSE
GEARTAVEHVVSYRESIPREPNSAWKRCRGAALTFYYLVHLSQKFGNVPDEDAATTSRVE
PLGTTFAAACTTPGESVPVCHRTEHALWKVEPSSSGSSKTLQLARWLVTLFSTKFGPFAA
IVVVVLGVLRLALSPCGKAPCPGFKLPKEDEPPEFYRFPCAVEKQPPKGADKVLPEHHSK
CAQCTFGYQMVMPKEGKCKRLALSLTYHERRDINAAPKCDACYAEKFVKVPSTYGEIINK
LADKTNKWHQHMWIKQLTKRAQELTAPSGLDRGPIFIFYFPGIRRYAWLALANFPRCGLG
YVFAEHARPVDDVHDVDGAVGKQRDRASQGVAHLEGPGRRRVHLAICRSETLFRAAPRSR
EGAHGCATEAIGDRTGCSKSFRIDYVIIYHAKRIYLARRRRVGNLRRRRANSSLGLGLGL
GLGLGLEATFFRNTPLELCYAPRPGYNPIGFLVDAPSPESSGAQDNLPAIARTMSIIIPV
RGSSNTVEVFNDELPEDPADVIDLLRAELAPLNTWCEFAVAYHNQGKREQFREILLGVVD
AFDVYEMQDFYRRQPDLFASGRLRVLNLLAASATSNFIAEELRKEAREALTYILITIAWR
QKALEYIGRADKISTSCSQTWLVKALFWIGEHHHDAHALRNSAYYADSALRSDNGASCNA
RLAKAAVLFHECKFSDALRLYASTLRSDPRAAGASARIGVGLCAYHLGDKDKALTALERA
LSLGTTCVEALVAVAILRLDQESDPKIMGRKGTGLLSKRATAGPVQVINSPGRMLSRARE
LDPTCSMALNHYGNHLFWLWQQSSLTGHAQMGSSSITCSTDPSDLLHSGTCIQLIQNGEN
KVALETKVRDVVILPGELDTWTVNLATPYRPLAKTDLHKLSIKVKEVPEIDDLASRAYHC
TAVPEIQAEAYFILGRNHHVRNEFQGALPFYVQACKLWPHFALAQFRLAQVRAAMNDLPA
ALEAAEVALELAPNAHEVLRLVGLLRLTQNSTKSPLEVLRHAIAQNSNDTCTWLALASAL
ERHIFTDDAVHERDPSLVRKAIDAYDNAAKLKWESSSTVPFQISNNVGVLHLCLGEARPA
QSAFLSALHDFEGCSPNQGPDATLSTVNPYCFMPSVTGSDVGVQGEFWHDYWKLIDGGAW
HSSTNLCTLWIDMPIDPPFTVGERIRIGDGGATCIVSVKSMRVSAIGKPISRENALVIQI
SEPLRMLSSTKPVNLPLYRIDLSCQTLMPNSVPIYLNLAQVHAAAGDLPRARELARLAVA
LAPNNIRCKLLLARLAFAMRDVEQARKHTASAVKISLGLMDGSSGAIFLGLVADSLSVAS
VMWRKLENYEEALKTLDYLKDLKISNRGFSTVYANATLSNLHFRDQIRSGRTGIGDIQPD
HRAQQLKNAADCARSALNDDPSCAMAAQALGAVLLESGKLDDSMLIFERVQEKLVAGSKA
SCGDSAIDRDASCSVLDAAINLAHSRLLAGKWLEAAANYATCAKVLIAMSAGKMFVPCSA
QTRRADVYHWLARACHGANEAQGARRALAAAIHLQPGNLAFRCHCAILLLESAHGLCRSS
SSPQVMSSLRSKGDYTVVLLAIARDMLLWLRNQCLQDSDSRPQPLEFKDLISKCDDVLQK
ARQYLECIASELTIRLLRLSLTHVSKMKQAIVCAMLSAYSIDRSVKTCKLCNTPHSSLRL
ARIVAERHVREAAATAAARATAEECMAKAQRKKEQLDSLQERWTIGSGSISNDGDVAVAG
DTQGESVDGTKKGIIES
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcgagtcacggtcgaaaggcttgccatccaaaatacccaaggccacttcacc
tacttccttcctataatgctccagcaactcatcattcaaacccaacccttggatactatt
aatcctctggccttctacacagatcatcccttcttggtggcccaagacattgacctcgca
ccacttattgttgatatctgcatacaccgtcttcgccagctccaacccaggcgacgccgg
cggatcgaagacctgcgtctatttttgctgcaacccaacctcgtctgctttctctcacaa
caccgaaagtcagccggcatgaaggaaggtaaagcaagcatgagctgcgagattgtggct
gcccgatctggggatctttgcgccacgttaggtgagggtgaccccttgagtgatacagca
actgcgcggcgcttcacagcagttcggaatctcagaggtggtgtgcttttggctccaccc
gcaacaacattccctgggaacagatcgccagtccaagcatctcgcggggcatcgtcagaa
ggagaggcgcgcacagcggtggaacacgtcgtttcgtaccgtgaatctattccgcgtgag
ccaaattccgcatggaagcgctgtcgtggtgccgccttgacgttttattacctcgtccac
ttatcacaaaaattcggcaacgtaccagatgaagacgccgcaacaacgagcagggttgaa
ccgttgggcacgaccttcgctgcagcgtgtacgacacccggtgagtctgttcctgtctgc
catcgaaccgagcatgcactctggaaggtcgaaccgagctcgtcggggtcctcaaagacg
ctccaactcgcacgatggcttgtgactttattttcaaccaaatttggtccttttgcagcc
atagtggtagtggtattgggggtactccggcttgcactgtcaccgtgcggcaaggcgccc
tgccctggatttaagctccccaaggaggacgagccgcctgaattctacaggttcccctgt
gccgtggagaaacaaccgccgaaaggcgccgacaaagtcctccctgagcatcacagcaaa
tgcgcacagtgcacgtttggctaccagatggtgatgccaaaggaaggcaagtgcaaacga
ctggcattgtccctcacgtaccatgaaagacgcgacatcaacgcggccccgaaatgcgat
gcctgctatgcggaaaagttcgtaaaagttccgtccacgtatggtgagatcatcaacaag
ttggcagataaaacaaacaaatggcatcagcacatgtggatcaagcaactgaccaaacgt
gcgcaggagctgaccgcgccgtccgggctcgataggggccccatatttatcttctatttc
ccgggcattcgccggtatgcgtggttagccctggctaatttcccccgatgtggtctgggc
tacgtgtttgctgagcacgcgcgacccgtagatgatgtgcacgacgtcgatggtgcagtc
gggaaacaacgcgaccgcgccagccagggcgtagcgcatctcgaaggaccaggccgccgt
cgcgttcacctagcgatctgccgctctgagacgctttttagagcggcgccaagaagtcgc
gaaggtgctcatggctgtgcaacagaagccatcggtgaccgcacaggctgctcaaagagt
tttcgcattgattacgtcatcatctatcatgcgaaacgaatttatttagcgcgccgaaga
cgggttgggaatttacgccgaaggcgggcaaattcgagtttagggttagggttagggtta
gggttagggttagggttagaggccacgttttttcgaaacactccactggaactttgctac
gcaccacgccctggctataatccaatcggctttttagttgatgcgccctctcctgagagc
tcaggagcgcaagacaatttacccgcgatcgcgaggacaatgtctataattatccccgtg
cgtgggtcctcaaacacagtggaggtgtttaatgacgagttgcccgaggacccagcagac
gttatcgacttattgcgcgcggagctcgcgcccctcaacacctggtgcgagtttgcggtg
gcttaccacaaccaaggaaaacgcgaacaatttcgtgaaatcttgctcggagttgtggat
gccttcgatgtatatgagatgcaagacttttatcggcgtcagccagacttatttgcttcc
ggccgattgcgtgtcctgaatttgttagcagcttctgcgacgagtaatttcattgccgag
gagctccgaaaagaagcccgagaggcattgacgtatattcttatcacaatcgcttggcgg
cagaaggcgctcgagtatattggaagagccgacaaaatttcaaccagctgctcgcagacg
tggctcgtgaaagctctcttttggatcggcgagcatcatcatgatgcgcatgcattgcga
aattctgcgtactacgctgactctgcacttcgcagcgataatggtgcttcgtgcaatgcg
agattagcaaaagcagcagttttgttccacgaatgcaaattttctgatgctttaaggttg
tatgcgagcacacttcgctcggacccaagagctgcaggcgcgagcgctcgcattggtgtt
ggactctgtgcctatcatctaggtgacaaagacaaagcacttactgcgcttgaacgtgca
ctttctcttggcacaacctgcgtagaagctctagttgctgttgctattcttcggcttgat
caagaaagcgatcccaaaatcatgggacggaaaggcactggccttttgtccaagcgggca
acagcgggacctgttcaggtcataaatagccccggacgcatgctcagtcgtgccagagaa
cttgatcccacatgctccatggcgcttaaccactatgggaatcatcttttctggttatgg
cagcaatcttcgcttactggtcatgcacaaatgggaagcagcagcatcacatgctccacc
gatccatctgatctccttcacagtggtacgtgcattcaactgatccaaaacggcgagaac
aaagttgctcttgagaccaaagttcgagatgtggtgattcttcctggtgaattggacact
tggactgtgaatcttgcgactccatatcgccctttggcaaaaacagatttgcacaaatta
agcatcaaagttaaagaagttcccgagattgatgatctagctagtcgcgcatatcactgt
actgctgtgcctgagatccaagctgaggcgtacttcattcttggtcggaatcaccacgtg
cgaaacgagtttcagggtgccctccctttctatgttcaagcttgcaaactttggccgcac
tttgcgcttgcgcaatttcgccttgcacaagtacgggcggccatgaacgatttaccggca
gctcttgaggcggcagaggtggcgctagaattggcgccaaacgcacacgaagttcttcgg
cttgttgggctattgcgccttacacagaattcgaccaagagtccactcgaagttctgaga
catgcaatcgctcagaactctaatgatacttgcacttggcttgcattggcaagtgccttg
gaacgccacatatttactgatgatgctgtccatgagcgtgatcccagtctagttcggaaa
gcaattgatgcgtacgataatgctgcaaagcttaagtgggaatcttcgtcaacggttcca
ttccaaatatcaaacaatgtcggagtgcttcatctttgtcttggcgaagctaggcctgca
cagtctgcttttttatccgcactgcatgattttgagggatgttcgcctaatcagggtcct
gatgcaactttatcgactgtcaacccgtattgttttatgccctcagtaactgggtcagat
gtcggtgtacagggcgagttctggcatgactattggaaactgattgacggcggagcatgg
cactcttcaacaaatctatgtacgctatggatagatatgccgattgacccacctttcact
gtgggcgaacgcatccgtattggtgatggcggtgctacttgcatagtgagtgtcaaaagc
atgcgtgtatcagcaattggcaaaccgatatcgcgcgagaatgcccttgtgattcagatt
tccgaacctctccgcatgttgagctcaaccaagcccgtcaatctgcctctttatcgcatc
gacttgtcatgtcaaactctaatgcccaattctgtccccatatacctgaatcttgctcaa
gttcatgccgcggccggtgatttgcccagagcgcgtgaactagccaggctggcagtagca
ctagcccccaataacatccgttgtaagcttctactagcgcgcctcgcttttgccatgagg
gatgtagagcaagctcggaaacacactgcatctgctgtgaaaatcagtttgggtctcatg
gatgggtcttcgggtgctatctttcttgggctggtcgcagattccctatcagttgcaagt
gttatgtggcgcaaattggaaaactacgaggaggcgctaaaaacattagactatcttaaa
gatctaaaaattagcaatcggggtttttcgactgtttacgcaaatgctactctcagcaat
ttgcactttcgtgaccagatcaggagcgggaggactggaattggtgacatccagcctgat
catcgcgctcagcagctcaagaatgcggctgattgtgcgcgtagtgccctaaatgatgat
ccttcatgcgccatggccgcgcaagctcttggagctgtcttactggaatcgggtaagcta
gatgactccatgctgatcttcgagcgcgtccaggagaagcttgtcgctggtagcaaggcg
tcttgcggtgattctgcgattgatcgagatgcctcgtgctctgttttagatgctgcaatc
aatctagcccattctcgcctccttgctggaaaatggttagaagcagctgcaaattatgct
acgtgcgctaaagtgctcatagccatgtcagccggcaaaatgttcgtaccatgtagtgct
cagacacggcgcgctgatgtgtaccattggcttgcccgtgcatgccatggcgcaaacgag
gctcaaggcgctagacgtgcacttgccgctgcgatccacctgcagccggggaaccttgcc
ttccgttgccattgcgccatacttctactcgaaagtgcccatgggttgtgtaggtcgtcc
tcttcgccacaagtgatgtcctccttgcgcagcaaaggtgattacaccgtagttttgctc
gcaattgcaagggatatgctattgtggcttcgaaatcaatgccttcaagactcagattct
cgtccacaacccctcgaattcaaagatttgatatcaaagtgcgatgacgtgttgcaaaag
gcgcgtcaatatctcgagtgcattgcaagtgaattaacaatcaggctcctacgcttgtcg
ctcacgcacgtgagcaagatgaaacaagcgatcgtctgcgccatgctcagcgcgtacagt
atagatcgcagtgttaagacctgcaaattatgcaacaccccccattcatcacttagactg
gctcgcattgtggcagaacgccacgtgcgggaagctgctgccactgcagctgctcgtgcc
actgctgaagagtgcatggccaaagcacaaaggaagaaggagcagctcgactctcttcaa
gagcgttggaccatcggctcgggatcaatttccaacgatggtgatgtcgctgtagctggt
gatacacaaggtgaatcagtagatggaaccaagaagggaatcattgagtcttga
DBGET
integrated database retrieval system
